Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
SSX4O60224 GPS2P1-201ENST00000411761 986 ntBASIC5.19□□□□□ -1.58
SSX4O60224 RPL12P12-201ENST00000424633 501 ntBASIC5.19□□□□□ -1.58
SSX4O60224 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX4O60224 AC073508.1-201ENST00000428866 656 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC011476.1-201ENST00000466725 307 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 OR11I1P-201ENST00000486033 954 ntBASIC5.19□□□□□ -1.58
SSX4O60224 OR9N1P-202ENST00000494289 481 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC090833.1-202ENST00000511073 781 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX4O60224 RN7SKP288-201ENST00000516227 268 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX4O60224 AP003049.1-201ENST00000529418 457 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX4O60224 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX4O60224 AC079600.1-201ENST00000550326 297 ntBASIC5.19□□□□□ -1.58
SSX4O60224 BICD1-206ENST00000551086 423 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX4O60224 AC027176.2-201ENST00000559166 746 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC009962.1-201ENST00000567327 3813 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AP005119.1-201ENST00000580956 292 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AP002884.5-201ENST00000595053 1132 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC239809.3-206ENST00000596091 741 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 AC011473.2-201ENST00000596286 240 ntTSL 3 BASIC5.19□□□□□ -1.58
SSX4O60224 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 AP004372.1-201ENST00000604842 844 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AL158211.2-201ENST00000607282 395 ntBASIC5.19□□□□□ -1.58
SSX4O60224 MIR6768-201ENST00000610734 72 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AL133445.2-201ENST00000611191 527 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC109309.2-201ENST00000612597 332 ntBASIC5.19□□□□□ -1.58
SSX4O60224 MIR6886-201ENST00000619864 61 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC080188.3-201ENST00000624842 748 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AC084816.1-204ENST00000628326 631 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 AC099654.6-201ENST00000636487 512 ntBASIC5.19□□□□□ -1.58
SSX4O60224 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
SSX4O60224 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 GHR-207ENST00000537449 4419 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 AL359091.1-201ENST00000449048 1734 ntBASIC5.19□□□□□ -1.58
SSX4O60224 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 CTDSPL2-204ENST00000558966 1895 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 TCF12-214ENST00000559710 1314 ntTSL 2 BASIC5.19□□□□□ -1.58
SSX4O60224 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC5.19□□□□□ -1.58
SSX4O60224 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
SSX4O60224 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 AC104964.3-201ENST00000606115 2860 ntBASIC5.18□□□□□ -1.58
SSX4O60224 THAP12P5-201ENST00000405864 2275 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AMN1-208ENST00000537562 1538 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX4O60224 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
SSX4O60224 OR10G7-202ENST00000641585 3449 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
SSX4O60224 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.18□□□□□ -1.58
SSX4O60224 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX4O60224 AF287957.1-201ENST00000607368 1595 ntBASIC5.18□□□□□ -1.58
SSX4O60224 LINC00309-201ENST00000431020 3307 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 AL158152.1-201ENST00000602652 1435 ntBASIC5.18□□□□□ -1.58
SSX4O60224 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX4O60224 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX4O60224 RANP4-201ENST00000413361 655 ntBASIC5.18□□□□□ -1.58
SSX4O60224 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX4O60224 AC079355.1-201ENST00000421770 223 ntBASIC5.18□□□□□ -1.58
SSX4O60224 NDUFS5P5-201ENST00000437256 321 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AC092106.1-201ENST00000444291 373 ntBASIC5.18□□□□□ -1.58
SSX4O60224 GAPDHP23-201ENST00000444823 993 ntBASIC5.18□□□□□ -1.58
SSX4O60224 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX4O60224 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX4O60224 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX4O60224 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX4O60224 AP006222.1-205ENST00000450734 457 ntBASIC5.18□□□□□ -1.58
SSX4O60224 CABYRP1-201ENST00000465493 1045 ntBASIC5.18□□□□□ -1.58
SSX4O60224 RN7SL352P-201ENST00000466002 277 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AC092865.4-201ENST00000477936 615 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AC093663.2-201ENST00000484625 313 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AC091544.1-201ENST00000484702 348 ntBASIC5.18□□□□□ -1.58
SSX4O60224 RN7SL193P-201ENST00000491708 276 ntBASIC5.18□□□□□ -1.58
SSX4O60224 DUBR-205ENST00000495228 411 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX4O60224 MOSPD2-206ENST00000497603 775 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 SSX6-203ENST00000509958 336 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX4O60224 RPL7L1P4-201ENST00000513004 707 ntBASIC5.18□□□□□ -1.58
SSX4O60224 SCARNA18.1-201ENST00000516330 83 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX4O60224 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX4O60224 OR4R2P-201ENST00000530815 597 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AC104009.1-203ENST00000531304 571 ntTSL 4 BASIC5.18□□□□□ -1.58
SSX4O60224 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
SSX4O60224 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX4O60224 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX4O60224 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX4O60224 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC5.18□□□□□ -1.58
SSX4O60224 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC5.18□□□□□ -1.58
SSX4O60224 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC5.18□□□□□ -1.58
SSX4O60224 AL645933.2-201ENST00000606743 1207 ntBASIC5.18□□□□□ -1.58
SSX4O60224 AC242628.1-201ENST00000606810 391 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms