Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 RPS3AP53-201ENST00000454716 778 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM38O00635 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM38O00635 AC092865.4-201ENST00000477936 615 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AC108729.1-201ENST00000487812 947 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 MGST2-204ENST00000506797 634 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM38O00635 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AP001318.3-202ENST00000528876 509 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM38O00635 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM38O00635 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM38O00635 AC073964.1-201ENST00000558938 308 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM38O00635 ZNF322P1-201ENST00000568013 1209 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 DHFRP1-201ENST00000579682 559 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AC145207.6-201ENST00000579981 782 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 AC090371.2-202ENST00000582239 644 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 AC027229.1-201ENST00000583887 253 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 AC025857.2-201ENST00000602711 238 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AC034236.3-201ENST00000605999 461 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AL645933.2-201ENST00000606743 1207 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 RN7SL787P-201ENST00000613000 284 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AC095038.2-201ENST00000621464 1070 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 LINC02033-201ENST00000623207 971 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM38O00635 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TRIM38O00635 OR7A1P-202ENST00000641542 1158 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 LINC01422-201ENST00000434868 6043 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 LRRC36-202ENST00000435835 1765 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM38O00635 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 ARPP21-202ENST00000396481 1304 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 MTND4P9-201ENST00000507819 1346 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 DSC2-202ENST00000280904 12325 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
TRIM38O00635 CBLB-205ENST00000407712 1493 ntTSL 2 BASIC5.96□□□□□ -1.45
TRIM38O00635 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC5.96□□□□□ -1.45
TRIM38O00635 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.96□□□□□ -1.45
TRIM38O00635 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.96□□□□□ -1.45
TRIM38O00635 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC5.96□□□□□ -1.45
TRIM38O00635 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 AL355488.2-201ENST00000609909 2850 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 KRTAP23-1-201ENST00000334160 211 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM38O00635 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 WFDC11-202ENST00000356562 642 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 CRYZ-203ENST00000370871 1292 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
TRIM38O00635 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM38O00635 AL096829.1-201ENST00000413677 457 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM38O00635 TPTE2P1-203ENST00000434100 514 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM38O00635 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM38O00635 RPS3AP38-201ENST00000435889 763 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 LMO7DN-IT1-201ENST00000436872 321 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM38O00635 KRT8P51-201ENST00000438938 274 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM38O00635 MTATP6P26-201ENST00000445926 662 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 GAS5-218ENST00000448718 565 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM38O00635 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 OSTCP1-201ENST00000455507 450 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 AC110749.1-201ENST00000462007 357 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 RPS4XP14-201ENST00000493072 781 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 RPL7L1P4-201ENST00000513004 707 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 MTATP6P9-201ENST00000515039 680 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM38O00635 SKP1-208ENST00000521216 899 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 AC112191.2-201ENST00000522428 333 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 C1DP5-201ENST00000525775 383 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 OR6M2P-201ENST00000529831 871 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 RPA2P3-201ENST00000533268 770 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 CASP1-216ENST00000534497 825 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM38O00635 AP000619.2-201ENST00000546014 969 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 AC011603.3-201ENST00000549516 279 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM38O00635 AC079600.1-201ENST00000550326 297 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.96□□□□□ -1.46
TRIM38O00635 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC5.96□□□□□ -1.46
TRIM38O00635 AL390816.1-201ENST00000553990 322 ntTSL 3 BASIC5.96□□□□□ -1.46
TRIM38O00635 AC125494.2-201ENST00000602431 657 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 AC133794.1-201ENST00000602731 914 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 AC022467.1-201ENST00000614738 749 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 MILR1-204ENST00000616498 747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 AC068880.4-201ENST00000623082 495 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 AC068057.2-201ENST00000624047 895 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 SNHG5-221ENST00000624295 632 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC5.96□□□□□ -1.46
TRIM38O00635 AC136428.4-201ENST00000634254 1155 ntBASIC5.96□□□□□ -1.46
TRIM38O00635 ZEB1-201ENST00000320985 5423 ntAPPRIS P3 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 RBMY1F-201ENST00000303766 1887 ntAPPRIS P5 TSL 1 (best) BASIC5.96□□□□□ -1.46
TRIM38O00635 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 101.4 ms