Protein–RNA interactions for Protein: O00409

FOXN3, Forkhead box protein N3, humanhuman

Predicted RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3O00409 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXN3O00409 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC121161.1-201ENST00000510606 652 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 RNU6-1308P-201ENST00000516817 103 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC110288.1-201ENST00000517950 446 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 HIGD1AP18-201ENST00000520730 278 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AC136777.2-201ENST00000522979 358 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AP000859.1-201ENST00000525536 307 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXN3O00409 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXN3O00409 AP005209.1-201ENST00000582531 928 ntTSL 5 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXN3O00409 MIR4420-201ENST00000583944 77 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AL138900.3-201ENST00000607010 629 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXN3O00409 AC017076.1-201ENST00000607613 578 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AP001033.2-201ENST00000609701 1003 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 KARSP1-201ENST00000451871 1752 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 AC123769.1-201ENST00000530992 3192 ntBASIC6.18□□□□□ -1.42
FOXN3O00409 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC6.18□□□□□ -1.42
FOXN3O00409 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
FOXN3O00409 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
FOXN3O00409 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXN3O00409 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
FOXN3O00409 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
FOXN3O00409 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
FOXN3O00409 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXN3O00409 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC6.17□□□□□ -1.42
FOXN3O00409 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
FOXN3O00409 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXN3O00409 RNU1-150P-201ENST00000362491 162 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 RNU1-136P-201ENST00000384181 164 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 AC087752.1-201ENST00000391360 558 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 HIST1H3PS1-201ENST00000404612 417 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 ATF1P1-201ENST00000406040 927 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 AL024507.1-201ENST00000412741 274 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 BX664727.1-201ENST00000416024 466 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 RPA2P2-201ENST00000419698 796 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 AL160175.1-201ENST00000428124 247 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 GNGT1-202ENST00000428834 731 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC126120.1-201ENST00000431082 470 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
FOXN3O00409 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXN3O00409 OR7E116P-201ENST00000448529 957 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXN3O00409 HNRNPDLP3-201ENST00000456745 380 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXN3O00409 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXN3O00409 DUTP1-201ENST00000493631 470 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXN3O00409 LINC00613-201ENST00000504365 467 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC025458.1-201ENST00000506046 166 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 NPY1R-204ENST00000509586 1017 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC093248.1-201ENST00000513197 417 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC020937.1-201ENST00000519677 1013 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 BUD31P1-201ENST00000521828 359 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXN3O00409 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXN3O00409 AL358913.1-201ENST00000554342 121 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 OR11H2-201ENST00000556246 948 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.17□□□□□ -1.42
FOXN3O00409 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC6.17□□□□□ -1.42
FOXN3O00409 OR5H6-201ENST00000615035 1113 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
FOXN3O00409 AC074140.1-201ENST00000621617 208 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 AC023510.2-201ENST00000622162 746 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 AC004808.1-201ENST00000627671 721 ntBASIC6.17□□□□□ -1.42
FOXN3O00409 PRKCH-228ENST00000640011 285 ntTSL 5 BASIC6.17□□□□□ -1.42
FOXN3O00409 OR5H6-202ENST00000641416 1032 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
FOXN3O00409 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC6.17□□□□□ -1.42
FOXN3O00409 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXN3O00409 MROH2B-201ENST00000399564 5239 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
FOXN3O00409 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.17□□□□□ -1.42
FOXN3O00409 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.16□□□□□ -1.42
FOXN3O00409 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 AL592429.1-201ENST00000403909 1473 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
FOXN3O00409 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 EOGT-208ENST00000540764 1584 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
FOXN3O00409 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXN3O00409 KIF27-203ENST00000376347 1030 ntTSL 5 BASIC6.16□□□□□ -1.42
FOXN3O00409 RNU6-1005P-201ENST00000384519 107 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 MIR137-201ENST00000385223 102 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 AC002524.1-201ENST00000411687 547 ntBASIC6.16□□□□□ -1.42
FOXN3O00409 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.16□□□□□ -1.42
FOXN3O00409 PCBP2P1-201ENST00000437262 977 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms