Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC073593.1-201ENST00000624500 411 ntBASIC4.55□□□□□ -1.68
SRRM4A7MD48 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC4.55□□□□□ -1.68
SRRM4A7MD48 ZNF253-205ENST00000640599 1208 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRRM4A7MD48 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRRM4A7MD48 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRRM4A7MD48 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRRM4A7MD48 LINC00707-201ENST00000436383 3070 ntTSL 2 BASIC4.55□□□□□ -1.68
SRRM4A7MD48 PREPL-201ENST00000260648 3672 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRRM4A7MD48 AP000473.2-201ENST00000602659 1537 ntBASIC4.55□□□□□ -1.68
SRRM4A7MD48 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.55□□□□□ -1.68
SRRM4A7MD48 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRRM4A7MD48 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
SRRM4A7MD48 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
SRRM4A7MD48 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
SRRM4A7MD48 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 PRG4-204ENST00000445192 5044 ntAPPRIS P3 TSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 PMS2-203ENST00000382321 1386 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 C3orf35-203ENST00000425564 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 TEK-205ENST00000615002 4666 ntTSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 PSG7-206ENST00000623675 1392 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 OR52A5-201ENST00000307388 3973 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 SLC9B1P1-201ENST00000331172 1337 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 MRE11-203ENST00000393241 2604 ntAPPRIS ALT1 TSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ZNF733P-202ENST00000444809 1573 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 OR4F13P-202ENST00000560066 2054 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 CHMP1B2P-201ENST00000399581 597 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 RPS6P23-201ENST00000413224 722 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC008060.2-201ENST00000415333 468 ntTSL 3 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC066692.1-201ENST00000421721 457 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 VTI1BP4-201ENST00000427516 527 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 TMEM183AP1-205ENST00000432739 290 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC019117.1-202ENST00000439046 589 ntTSL 3 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AL137186.1-201ENST00000440436 480 ntTSL 3 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 MTND2P30-201ENST00000456663 382 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 RN7SL197P-201ENST00000466981 299 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 RN7SL170P-201ENST00000487098 295 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AK6-203ENST00000502819 743 ntTSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 MTCO1P31-201ENST00000506355 492 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 MGST2-204ENST00000506797 634 ntTSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AP000763.3-201ENST00000542598 334 ntTSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AP000619.2-201ENST00000546014 969 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 AL512310.9-201ENST00000553311 948 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 FRMD6-AS2-201ENST00000556617 548 ntTSL 4 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ZNF235-204ENST00000589799 955 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC090227.1-201ENST00000590532 936 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC007423.1-201ENST00000605009 627 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 KATNBL1P5-201ENST00000605015 517 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 RPL21P136-201ENST00000605378 396 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 MIR7109-201ENST00000613748 65 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 Six3os1_2.1-201ENST00000616963 217 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 AP003400.6-201ENST00000624698 740 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 OR8G3P-202ENST00000641572 1255 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ZNF571-202ENST00000358744 2049 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 CARD6-201ENST00000254691 4221 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ERCC6L-201ENST00000334463 4243 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 BMPR2-204ENST00000638587 3443 ntTSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ZNF92-203ENST00000431504 2947 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 BCORP1-203ENST00000513194 5093 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 IL15-204ENST00000477265 6026 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 PEX2-201ENST00000357039 4317 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.54□□□□□ -1.68
SRRM4A7MD48 CASC19-284ENST00000642142 1868 ntBASIC4.54□□□□□ -1.68
SRRM4A7MD48 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
SRRM4A7MD48 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 PLCH1-202ENST00000340059 6168 ntAPPRIS ALT2 TSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
SRRM4A7MD48 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.53□□□□□ -1.68
SRRM4A7MD48 AC007938.2-201ENST00000604666 2634 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms