Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC018680.1-201ENST00000513332 875 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 MTCYBP13-201ENST00000578634 1093 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 Mico1.1-201ENST00000611698 204 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC009163.6-201ENST00000612367 342 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AF117829.2-201ENST00000619538 361 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 DUXB-201ENST00000633875 1079 ntAPPRIS P1 TSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 PANDAR-201ENST00000629595 1506 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 SNORA67-201ENST00000384423 137 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC211486.3-201ENST00000412694 621 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 NOP56P2-201ENST00000447491 769 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 RN7SL97P-201ENST00000486780 299 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC002563.1-201ENST00000535109 451 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC134349.2-201ENST00000535136 910 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC005341.1-201ENST00000571086 708 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC087763.1-201ENST00000603391 286 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC026367.3-201ENST00000619032 590 ntBASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 SAMD12-202ENST00000409003 8866 ntAPPRIS P1 TSL 5 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 FILIP1L-201ENST00000331335 4219 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.74□□□□□ -1.65
KIAA1549Q9HCM3 AC114947.2-201ENST00000565748 2125 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 ALB-202ENST00000401494 1659 ntTSL 5 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 SNORA70.6-201ENST00000383934 134 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 GPS2P1-201ENST00000411761 986 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC138761.5-201ENST00000433967 325 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 RN7SL197P-201ENST00000466981 299 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC079841.1-201ENST00000481228 950 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC090058.1-201ENST00000498788 435 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC111000.6-201ENST00000514471 709 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 RNU4ATAC18P-201ENST00000516179 126 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC060766.1-201ENST00000590824 627 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AL449283.1-201ENST00000602631 3403 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 DNAJC16-202ENST00000375847 6069 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 RNU4-4P-201ENST00000364588 130 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 MIR550A3-201ENST00000390735 95 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 HSPA8P15-201ENST00000401676 786 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 RPL5P2-201ENST00000429598 854 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 LINC01436-201ENST00000457157 1048 ntTSL 2 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC133644.2-201ENST00000608142 540 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AP002799.1-201ENST00000623552 423 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 AC109446.4-201ENST00000623235 2755 ntBASIC4.73□□□□□ -1.65
KIAA1549Q9HCM3 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.72□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 86.4 ms