Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 AC098592.2-201ENST00000413158 265 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 KCTD9P1-201ENST00000430462 1167 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC073109.1-201ENST00000445066 978 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 RPL36AP39-201ENST00000445859 318 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 RPS24P16-201ENST00000497294 392 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC097491.1-201ENST00000507857 672 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 HMGB1P44-201ENST00000508597 572 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC107396.1-201ENST00000509641 735 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC112191.2-201ENST00000522428 333 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 CA3-AS1-203ENST00000524052 430 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 NDUFA5-207ENST00000471770 5608 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 RNF19BPY-201ENST00000458209 1550 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC027279.1-201ENST00000568885 4284 ntBASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.49□□□□□ -1.53
LRRC40Q9H9A6 MTCO1P15-201ENST00000529569 1526 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC079298.1-201ENST00000625026 1619 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 RNF32-203ENST00000392741 2260 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 RNU1-19P-201ENST00000363306 165 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 RNU6-1331P-201ENST00000363658 106 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 SPRR2E-202ENST00000368751 692 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 HYALP1-201ENST00000417674 1279 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 RPL19P16-201ENST00000433839 588 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 RPS10P18-201ENST00000442662 495 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 HMGN1P36-201ENST00000446623 298 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC090804.1-201ENST00000448870 490 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC098976.1-201ENST00000513014 541 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 CASC19-203ENST00000523510 575 ntTSL 3 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC078878.1-201ENST00000539832 958 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AL139354.1-201ENST00000554319 645 ntTSL 5 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 NMNAT1P5-201ENST00000559657 841 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC015720.2-201ENST00000567709 334 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC009027.1-201ENST00000604510 479 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 Z95327.3-201ENST00000610385 572 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AL354950.1-201ENST00000614150 568 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC074140.1-201ENST00000621617 208 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 OR8A1-204ENST00000642111 1145 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 AC002525.1-201ENST00000624392 1622 ntBASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC5.48□□□□□ -1.53
LRRC40Q9H9A6 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 FAM19A2-215ENST00000551619 2718 ntAPPRIS P1 TSL 2 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 DENND4A-201ENST00000431932 5875 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 OR4K13-201ENST00000315693 915 ntAPPRIS P1 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 OR1L6-202ENST00000373684 1044 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 SRSF1P1-201ENST00000424058 520 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 HMGN2P27-201ENST00000427352 270 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 HSPD1P12-201ENST00000429127 1069 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 GSTM5P1-201ENST00000434751 660 ntBASIC5.47□□□□□ -1.53
LRRC40Q9H9A6 SERPINA7P1-201ENST00000443077 631 ntBASIC5.47□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms