Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 DPPA2P3-201ENST00000411853 655 ntBASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AF015720.1-201ENST00000412240 349 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 BMS1P17-202ENST00000416720 316 ntBASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 RPL5P25-201ENST00000441148 775 ntBASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AC073850.1-201ENST00000449243 255 ntBASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 LINC01729-201ENST00000450640 358 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AC093827.1-201ENST00000480094 861 ntBASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AC055758.1-201ENST00000494509 569 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 CDC42P3-201ENST00000518493 633 ntBASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 AC243829.4-201ENST00000620056 701 ntTSL 5 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 CU639417.4-201ENST00000623928 207 ntBASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 KDM3B-209ENST00000542866 3634 ntTSL 2 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 CD86-204ENST00000469710 1604 ntTSL 2 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.42□□□□□ -1.38
UPF3BQ9BZI7 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 RPL7AP49-201ENST00000429522 581 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AL591438.1-201ENST00000433508 581 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC073909.1-201ENST00000447112 999 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AL031963.1-201ENST00000447644 695 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC092754.1-201ENST00000472975 479 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 RN7SL826P-201ENST00000479724 288 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 RN7SL30P-201ENST00000488416 306 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 NDUFA5P12-201ENST00000503796 343 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC074087.1-201ENST00000512059 724 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 LINC01365-202ENST00000512219 637 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 ARL6IP1P3-201ENST00000524544 560 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 TAT-AS1-201ENST00000561529 873 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 MIR4433B-201ENST00000581329 102 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 SETP3-201ENST00000581726 813 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AL356608.1-201ENST00000610034 820 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AC132068.1-201ENST00000623805 459 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 SYCP1-201ENST00000369518 3452 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AL449283.1-201ENST00000602631 3403 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 ZNF790-201ENST00000356725 3037 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 AL442128.2-201ENST00000620246 1824 ntBASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
UPF3BQ9BZI7 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 RAB30-212ENST00000533486 9929 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 OR4K12P-201ENST00000406538 961 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 MIR1286-201ENST00000408112 78 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AL590999.1-205ENST00000420293 440 ntTSL 3 BASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AC017019.1-201ENST00000426129 261 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 RPL19P16-201ENST00000433839 588 ntBASIC6.4□□□□□ -1.38
UPF3BQ9BZI7 AL772161.1-201ENST00000439130 476 ntBASIC6.4□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms