Protein–RNA interactions for Protein: Q9BY43

CHMP4A, Charged multivesicular body protein 4a, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4AQ9BY43 MTCO3P21-201ENST00000430791 643 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AL162385.2-201ENST00000437864 285 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AL450996.1-201ENST00000445574 1202 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC009963.4-201ENST00000448535 339 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 SETP20-201ENST00000457046 852 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC093166.4-201ENST00000457867 318 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 IGHVIII-38-1-201ENST00000521454 282 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 CREBZF-209ENST00000534224 545 ntTSL 4 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC078878.1-201ENST00000539832 958 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC092140.1-201ENST00000563090 549 ntTSL 3 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC018659.2-201ENST00000624690 715 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC011504.1-201ENST00000623331 4103 ntBASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 C15orf41-201ENST00000338183 2578 ntTSL 5 BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 NRDE2-201ENST00000354366 14208 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
CHMP4AQ9BY43 AC009313.2-201ENST00000417893 1941 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 PSD3-204ENST00000440756 11690 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 TMSB4XP4-201ENST00000323496 618 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 RNA5SP122-201ENST00000384457 108 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC099336.2-201ENST00000422457 254 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AL008723.2-201ENST00000426354 562 ntTSL 4 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 HMGB3P24-201ENST00000433260 622 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC002504.1-201ENST00000438281 691 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC005297.1-201ENST00000444765 862 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC099560.2-201ENST00000457554 255 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC245041.2-201ENST00000479781 376 ntTSL 5 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC087672.1-201ENST00000479876 766 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC011405.1-202ENST00000504658 803 ntTSL 3 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 NRBF2P4-201ENST00000520874 850 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC078899.1-201ENST00000521432 1185 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC079866.2-201ENST00000541870 515 ntTSL 3 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC011445.2-201ENST00000599274 173 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC063977.5-201ENST00000601044 974 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 ODAM-201ENST00000396094 1319 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 MGAM2-201ENST00000477922 7867 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 AC091305.2-201ENST00000624049 1576 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.4□□□□□ -1.22
CHMP4AQ9BY43 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC7.4□□□□□ -1.23
CHMP4AQ9BY43 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.23
CHMP4AQ9BY43 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC7.4□□□□□ -1.23
CHMP4AQ9BY43 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CHMP4AQ9BY43 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
CHMP4AQ9BY43 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC7.4□□□□□ -1.23
CHMP4AQ9BY43 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 EXD1-201ENST00000314992 2942 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 CNGA1-207ENST00000514170 2837 ntAPPRIS P3 TSL 5 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 OR2L3-202ENST00000641161 2830 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC090971.4-201ENST00000560291 1800 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 ALB-209ENST00000503124 1741 ntTSL 5 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 RNA5SP394-201ENST00000364216 119 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 GNG5P2-201ENST00000372054 207 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 HMGB1P20-201ENST00000402555 677 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AL035696.2-201ENST00000407941 709 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 RN7SKP206-201ENST00000410823 293 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 RPL6P29-201ENST00000414863 865 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 NIFKP3-201ENST00000417799 865 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC127526.2-201ENST00000426436 775 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC023512.1-201ENST00000444513 499 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 MORF4L1P4-201ENST00000450245 976 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 RSU1P1-201ENST00000453416 441 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC009120.1-201ENST00000493458 473 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC104109.1-201ENST00000498563 436 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC010451.1-201ENST00000509057 556 ntTSL 3 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 FTH1P11-201ENST00000517577 551 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC112191.2-201ENST00000522428 333 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 POLR2K-203ENST00000522439 543 ntTSL 2 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC096996.1-201ENST00000563813 325 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC012146.2-201ENST00000576545 416 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 MIMT1-201ENST00000597105 1050 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 CDC42EP3P1-201ENST00000601004 764 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 SAMD9L-209ENST00000610760 1221 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AC015908.5-201ENST00000623289 343 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 AL691477.1-201ENST00000624398 162 ntBASIC7.39□□□□□ -1.23
CHMP4AQ9BY43 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC7.39□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms