Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 AC105411.1-201ENST00000568776 1470 ntTSL 4 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 KCNH7-205ENST00000621889 1893 ntTSL 5 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 RNA5SP335-201ENST00000363817 110 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 NIPA2P1-201ENST00000426223 976 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 UBE2D3P3-201ENST00000426992 425 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 OR6D1P-201ENST00000436165 939 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC096775.1-201ENST00000437724 448 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AURKAPS1-201ENST00000451805 1212 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 OR11I1P-201ENST00000486033 954 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 NDUFB5P1-201ENST00000508134 564 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC092593.2-201ENST00000513866 913 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 RNU6-1102P-201ENST00000516149 96 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC022832.1-201ENST00000530718 645 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 HAGLR-211ENST00000549329 609 ntTSL 4 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC025580.2-202ENST00000558536 715 ntTSL 3 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC106785.3-201ENST00000564064 847 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC005776.1-201ENST00000603164 290 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 BNIP3P35-201ENST00000604530 490 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AC090510.2-201ENST00000617465 629 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AL138955.1-201ENST00000622881 1040 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 CUZD1-205ENST00000368904 2903 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 KIAA1549L-202ENST00000321505 11678 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 KIF1B-204ENST00000377086 10669 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 JCHAIN-201ENST00000254801 1438 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.92□□□□□ -1.3
RTFDC1Q9BY42 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 FTO-206ENST00000471389 11766 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 L3MBTL3-201ENST00000361794 4217 ntAPPRIS P4 TSL 5 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 TM4SF20-201ENST00000304568 2296 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 RNF2P1-201ENST00000442955 1010 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AL357052.1-201ENST00000443504 381 ntTSL 3 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 MOB1AP2-201ENST00000446060 614 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC091685.2-201ENST00000454924 864 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 MTND2P6-201ENST00000455337 1030 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 RNU1-88P-201ENST00000459274 128 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC105384.2-201ENST00000508433 640 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC147055.3-201ENST00000510547 851 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 RN7SKP34-201ENST00000516142 244 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC021393.1-201ENST00000531077 433 ntTSL 3 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AP002370.2-202ENST00000533669 908 ntTSL 5 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC090680.2-201ENST00000550279 742 ntTSL 3 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC126365.2-201ENST00000580630 379 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC133644.2-201ENST00000608142 540 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC110792.4-201ENST00000609843 298 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 Mico1.1-201ENST00000611698 204 ntBASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 AC009093.5-201ENST00000620963 359 ntTSL 2 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 ALPK2-201ENST00000361673 7303 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
RTFDC1Q9BY42 GPATCH2L-201ENST00000261530 14007 ntTSL 2 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 LINC00700-201ENST00000413603 2097 ntTSL 2 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 DEFB106B-201ENST00000335479 316 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 MIR130A-201ENST00000385274 89 ntBASIC6.9□□□□□ -1.3
RTFDC1Q9BY42 AL360271.1-201ENST00000395679 510 ntBASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 88.5 ms