Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC4.89□□□□□ -1.63
RSPO3Q9BXY4 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 SNX10-202ENST00000396376 2491 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 ICE2P1-201ENST00000512800 1849 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 IL31RA-204ENST00000396834 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 TAAR1-201ENST00000275216 1020 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 RNU4-2-201ENST00000365668 141 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AL391422.1-201ENST00000402155 436 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 TNPO1P1-201ENST00000423641 1138 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 HMGN2P27-201ENST00000427352 270 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 RPS26P41-201ENST00000450370 284 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 BX546450.1-201ENST00000454307 482 ntTSL 2 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC138832.1-201ENST00000522871 556 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 LSM3P2-201ENST00000551246 273 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AL049829.2-201ENST00000554010 285 ntTSL 3 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC092078.2-201ENST00000560900 581 ntTSL 4 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC020978.7-201ENST00000575953 1187 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 MRO-208ENST00000588444 866 ntTSL 3 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC009027.1-201ENST00000604510 479 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC010245.2-201ENST00000606908 1167 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AL022394.1-201ENST00000606979 292 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC008833.1-201ENST00000611633 691 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 RN7SL787P-201ENST00000613000 284 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC108359.1-201ENST00000616451 1211 ntBASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 CGA-206ENST00000630630 832 ntTSL 2 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
RSPO3Q9BXY4 AC006210.2-201ENST00000367074 1545 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 LINC02225-201ENST00000510444 4069 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AMELX-201ENST00000348912 737 ntTSL 5 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC005294.1-201ENST00000355509 281 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 SMARCA2-207ENST00000382186 955 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 CLUHP1-201ENST00000435012 1190 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC046176.1-201ENST00000435260 1170 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 GAPDHP25-201ENST00000447061 1001 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 LINC00704-203ENST00000449712 703 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 RN7SL717P-201ENST00000478343 297 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 RN7SL423P-201ENST00000486202 304 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 NPM1P28-201ENST00000492269 840 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 EIF3LP3-201ENST00000495197 822 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AL136038.1-201ENST00000497246 351 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 MYL12BP2-201ENST00000503948 512 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 RPL7L1P4-201ENST00000513004 707 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC108471.2-203ENST00000532680 517 ntTSL 5 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC027544.3-201ENST00000535082 757 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 PDCD6IPP2-207ENST00000566321 1069 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC106730.2-201ENST00000566641 540 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 LINC00663-202ENST00000586816 306 ntTSL 2 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 FO393422.1-201ENST00000603908 708 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC013244.1-201ENST00000604279 193 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 Z95327.3-201ENST00000610385 572 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC244517.3-201ENST00000616254 1235 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 MIR6826-201ENST00000617808 98 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC073869.10-201ENST00000642016 354 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 AC006484.1-201ENST00000435086 1884 ntBASIC4.87□□□□□ -1.63
RSPO3Q9BXY4 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms