Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 USP8-202ENST00000396444 19026 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
SSX3Q99909 ANAPC1P1-201ENST00000426186 2145 ntBASIC4.9□□□□□ -1.62
SSX3Q99909 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX3Q99909 RN7SKP15-201ENST00000364742 309 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX3Q99909 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX3Q99909 AL589655.1-201ENST00000405398 482 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 NCSTNP1-201ENST00000406229 144 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 OR13Z1P-201ENST00000416141 834 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 CASP5-203ENST00000418434 1023 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX3Q99909 OR6K4P-201ENST00000423179 955 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AL445528.1-201ENST00000426330 420 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX3Q99909 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSX3Q99909 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX3Q99909 AL445238.1-201ENST00000450029 712 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX3Q99909 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX3Q99909 CST12P-201ENST00000457644 362 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AC008410.1-201ENST00000483777 339 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AC083795.1-201ENST00000491760 320 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 EIF3LP3-201ENST00000495197 822 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.9□□□□□ -1.63
SSX3Q99909 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.9□□□□□ -1.63
SSX3Q99909 OR5H7P-201ENST00000514084 930 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 snoU109.5-201ENST00000516231 132 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 RNA5SP228-201ENST00000516232 133 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AC011131.1-201ENST00000521224 252 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX3Q99909 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX3Q99909 AC074029.2-201ENST00000551045 634 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 LSM3P2-201ENST00000551246 273 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX3Q99909 MIR4472-2-201ENST00000582069 67 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 MTCO2P22-201ENST00000603246 681 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX3Q99909 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX3Q99909 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX3Q99909 AC009032.1-201ENST00000617574 431 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AC005618.4-201ENST00000625053 554 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AC003992.1-201ENST00000635364 557 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 AC079776.5-201ENST00000641920 211 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.9□□□□□ -1.63
SSX3Q99909 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC4.9□□□□□ -1.63
SSX3Q99909 MYBPC1-203ENST00000392934 3644 ntAPPRIS ALT2 TSL 2 BASIC4.9□□□□□ -1.63
SSX3Q99909 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC4.9□□□□□ -1.63
SSX3Q99909 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSX3Q99909 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
SSX3Q99909 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.9□□□□□ -1.63
SSX3Q99909 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
SSX3Q99909 AC004076.2-201ENST00000620532 3323 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX3Q99909 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
SSX3Q99909 HDAC1P2-201ENST00000453661 1398 ntBASIC4.9□□□□□ -1.63
SSX3Q99909 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC4.89□□□□□ -1.63
SSX3Q99909 ZNF117-201ENST00000282869 9080 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
SSX3Q99909 AL157756.1-201ENST00000532515 2859 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 PSG10P-201ENST00000501199 1500 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 EIF2AK2-201ENST00000233057 10042 ntAPPRIS P1 TSL 2 BASIC4.89□□□□□ -1.63
SSX3Q99909 RNU4-44P-201ENST00000363050 141 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 RNU105B-201ENST00000364478 208 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 TPT1-204ENST00000379060 764 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX3Q99909 AMZ2P2-201ENST00000406819 1057 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC4.89□□□□□ -1.63
SSX3Q99909 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX3Q99909 IPPKP1-201ENST00000422501 768 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
SSX3Q99909 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX3Q99909 FAM204CP-201ENST00000424489 642 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AC017019.1-201ENST00000426129 261 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 CCNB1IP1P1-201ENST00000428976 839 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 RSL24D1P8-201ENST00000434442 492 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX3Q99909 AL035706.1-201ENST00000439186 683 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX3Q99909 AL589765.3-201ENST00000446084 462 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AC016027.4-201ENST00000450866 277 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AL358876.1-201ENST00000453364 1075 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 RAB28P2-201ENST00000454299 641 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AC112187.1-201ENST00000455837 479 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 RPL5P13-201ENST00000462840 709 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 RN7SL809P-201ENST00000482040 297 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 RNA5SP230-201ENST00000517039 122 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC4.89□□□□□ -1.63
SSX3Q99909 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.89□□□□□ -1.63
SSX3Q99909 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX3Q99909 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC4.89□□□□□ -1.63
SSX3Q99909 C1GALT1P1-201ENST00000548895 1089 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AC092868.3-201ENST00000560515 784 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX3Q99909 AC091059.1-201ENST00000585190 215 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX3Q99909 AC011478.1-201ENST00000593140 554 ntTSL 4 BASIC4.89□□□□□ -1.63
SSX3Q99909 AC027334.1-201ENST00000603257 310 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AC108865.2-201ENST00000606881 432 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 AC244131.2-201ENST00000612592 512 ntTSL 3 BASIC4.89□□□□□ -1.63
SSX3Q99909 AC096861.1-201ENST00000616652 240 ntBASIC4.89□□□□□ -1.63
SSX3Q99909 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX3Q99909 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC4.89□□□□□ -1.63
SSX3Q99909 FO681491.1-202ENST00000623392 737 ntBASIC4.89□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms