Protein–RNA interactions for Protein: Q96PX6

CCDC85A, Coiled-coil domain-containing protein 85A, humanhuman

Predicted RBP Predictions only

Length 553 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85AQ96PX6 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 SRGAP3-213ENST00000618999 3929 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 GAPVD1-202ENST00000297933 6003 ntAPPRIS ALT2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 RNA5SP65-201ENST00000363166 119 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 SNORD35A-201ENST00000363389 86 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 RNA5SP485-201ENST00000365053 119 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL512430.2-201ENST00000406786 339 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 MIR548F1-201ENST00000408667 84 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 RPS15AP38-201ENST00000413110 372 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL663061.1-201ENST00000416625 580 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 TAF13P2-201ENST00000416876 286 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 NENFP1-201ENST00000419476 466 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL022100.2-201ENST00000422548 389 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 VN1R20P-201ENST00000425215 966 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC241584.1-201ENST00000438469 1241 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC096639.1-201ENST00000456240 347 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 CCDC75P1-201ENST00000469247 791 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 H3F3AP5-201ENST00000475267 429 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 SNORA31.13-201ENST00000516624 135 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC011853.1-201ENST00000518911 454 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC005363.1-201ENST00000530779 351 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL121579.1-201ENST00000555129 305 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC134669.1-201ENST00000581275 672 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL137072.1-201ENST00000603444 466 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL499605.1-201ENST00000604628 403 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AP003117.2-201ENST00000606010 545 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL391497.1-201ENST00000608671 547 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL589743.6-201ENST00000611025 117 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL354718.1-201ENST00000619764 589 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL607023.1-201ENST00000620045 248 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AL162377.2-201ENST00000624532 337 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC063952.1-203ENST00000634410 658 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC024475.3-203ENST00000634971 854 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 LINC01808-202ENST00000641680 1116 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 GLYATL1P1-201ENST00000528297 1607 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 TRIM6-TRIM34-201ENST00000354852 3391 ntAPPRIS P1 TSL 2 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 TMEFF2-203ENST00000409056 3364 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC096582.3-201ENST00000636578 3716 ntAPPRIS P1 TSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 ZNF33B-201ENST00000359467 5958 ntAPPRIS P2 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 TEX14-203ENST00000389934 4927 ntAPPRIS P4 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC022507.1-201ENST00000548349 1505 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 MTCO1P25-201ENST00000414449 1799 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 ENO1P4-201ENST00000416471 1785 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 VIRMA-202ENST00000421249 3924 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 CLASP2-225ENST00000635664 4176 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 CORIN-211ENST00000610355 4696 ntTSL 5 BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 AC006600.2-201ENST00000624834 2506 ntBASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
CCDC85AQ96PX6 LINC00907-205ENST00000589068 1812 ntTSL 2 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 INHBA-AS1-203ENST00000422822 2312 ntTSL 2 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 MITF-206ENST00000394351 1956 ntAPPRIS P3 TSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 HEPH-206ENST00000441993 4310 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 CXCR6-202ENST00000438735 2242 ntAPPRIS P1 TSL 3 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 SELE-203ENST00000367775 3389 ntTSL 5 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 AC073055.1-201ENST00000456901 1621 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 LINC00630-201ENST00000416381 2012 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 PRLR-212ENST00000513753 1525 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 BORCS7-ASMT-201ENST00000299353 2670 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 RPL23AP59-201ENST00000399415 461 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 RPS27AP11-201ENST00000402798 447 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 PRELID1P1-201ENST00000403549 660 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 BTF3P7-201ENST00000407097 488 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 AL669841.1-201ENST00000425723 558 ntTSL 2 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 RPL34P27-201ENST00000428810 349 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 KCTD9P1-201ENST00000430462 1167 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 HTR5BP-202ENST00000434708 1193 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 VN1R54P-201ENST00000435210 1049 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 GAPDHP59-201ENST00000435908 267 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 AL353898.1-201ENST00000444055 238 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 AL137845.2-201ENST00000444292 988 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 AC023271.1-201ENST00000445936 1090 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 ST13P20-201ENST00000447996 1065 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 KATNBL1P6-201ENST00000453433 915 ntBASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 LINC02505-202ENST00000510597 776 ntTSL 3 BASIC8.26□□□□□ -1.09
CCDC85AQ96PX6 AC006499.4-201ENST00000510947 694 ntBASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 99.7 ms