Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 RNU6-792P-201ENST00000363490 107 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 RN7SKP69-201ENST00000365390 305 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 GKN1-201ENST00000377938 814 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 PRH2-201ENST00000381847 641 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AL035405.1-201ENST00000400795 710 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 NENFP1-201ENST00000419476 466 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 VN1R21P-201ENST00000426703 765 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC104843.2-201ENST00000427666 297 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AL663074.2-201ENST00000440621 479 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 BMS1P10-201ENST00000443754 1120 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 RAET1E-AS1-201ENST00000446954 491 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC007998.1-201ENST00000474156 672 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 RN7SL57P-201ENST00000493687 290 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 RN7SL284P-201ENST00000498823 275 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC078899.1-201ENST00000521432 1185 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC004923.2-201ENST00000529649 369 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC068722.1-202ENST00000559600 655 ntTSL 3 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 CT45A1-202ENST00000594565 1007 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AL133481.2-203ENST00000607558 139 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AL391834.2-201ENST00000609982 546 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 REV3L-214ENST00000619481 969 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 OSER1-AS1-205ENST00000623343 827 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 TCP1P3-201ENST00000414406 1498 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 CDON-206ENST00000531738 5803 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 PROM1-201ENST00000447510 3977 ntAPPRIS P3 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 AC109446.4-201ENST00000623235 2755 ntBASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 RAP1GDS1-202ENST00000339360 2092 ntAPPRIS ALT1 TSL 1 (best) BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.96□□□□□ -1.3
CHMP4CQ96CF2 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 PDZRN4-203ENST00000539469 3041 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC116158.1-201ENST00000560231 2129 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 C12orf4-209ENST00000545746 2168 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 ZNF382-201ENST00000292928 8329 ntAPPRIS P3 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AL445928.1-201ENST00000435545 222 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AL139161.2-201ENST00000438371 740 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 VN1R110P-201ENST00000438988 971 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 SNRPFP2-201ENST00000440710 251 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 RPS7P3-201ENST00000443360 580 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC087501.1-201ENST00000445617 715 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 RPL31P15-201ENST00000449770 338 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 FCF1P6-201ENST00000456841 595 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC011476.1-201ENST00000466725 307 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC099521.1-201ENST00000482557 334 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC104248.1-202ENST00000524134 486 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AP000942.2-201ENST00000526310 628 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 OR5M11-201ENST00000528616 1020 ntAPPRIS P1 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 LINC02274-201ENST00000555539 1174 ntTSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC136944.1-201ENST00000567464 560 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 GARSP1-201ENST00000570895 719 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 TXNP4-201ENST00000575018 310 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC022211.1-201ENST00000579554 717 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AL136131.3-201ENST00000607600 188 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AL139099.4-201ENST00000614802 114 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC241377.1-201ENST00000619797 406 ntBASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 C1orf195-202ENST00000625027 441 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 PCBP1-AS1-282ENST00000625783 826 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 DARS-AS1-227ENST00000627442 633 ntTSL 5 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC6.95□□□□□ -1.3
CHMP4CQ96CF2 OR8G3P-202ENST00000641572 1255 ntBASIC6.95□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms