Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RPL38P1-201ENST00000460914 211 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RN7SL146P-201ENST00000472338 297 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RN7SL864P-201ENST00000493457 285 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC106822.1-201ENST00000502647 526 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 SELENOP-204ENST00000507920 786 ntTSL 5 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RNU6-150P-201ENST00000516237 95 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC114550.1-201ENST00000518846 573 ntTSL 4 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 CHCHD7-215ENST00000523061 557 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AP003385.2-201ENST00000524910 973 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC103681.1-202ENST00000534342 449 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC122688.2-201ENST00000543922 585 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 PRB1-203ENST00000545626 710 ntAPPRIS ALT2 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AL163932.1-201ENST00000555776 542 ntTSL 4 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AF001548.1-201ENST00000577048 550 ntTSL 4 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC073091.2-201ENST00000603205 907 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC112250.2-201ENST00000609450 491 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC239803.3-201ENST00000614663 494 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC009159.1-201ENST00000618386 642 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 TEX41-279ENST00000629149 609 ntTSL 5 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC024614.3-201ENST00000637860 256 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 MIR193BHG-210ENST00000641327 515 ntBASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RNF14-203ENST00000394514 2905 ntTSL 2 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 PLXNA4-201ENST00000321063 13061 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 IL18RAP-202ENST00000409369 1890 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 PCBP1-AS1-243ENST00000458698 1893 ntTSL 3 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 UIMC1-211ENST00000510698 1334 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 NDUFS1-201ENST00000233190 11819 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 MAGT1-201ENST00000358075 4047 ntAPPRIS P2 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 AC135178.2-201ENST00000582471 3087 ntAPPRIS P1 TSL 5 BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 TMC5-201ENST00000219821 3687 ntAPPRIS P3 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 DUBR-202ENST00000466734 2737 ntTSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC7.21□□□□□ -1.26
DEPDC4Q8N2C3 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 CNOT4-201ENST00000315544 3783 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 MGAT4A-203ENST00000409391 2018 ntAPPRIS P1 TSL 5 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 NF1-201ENST00000356175 12362 ntAPPRIS P3 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 CNTN4-AS1-201ENST00000442749 1640 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 MAPRE2-203ENST00000436190 4323 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 DMC1-203ENST00000428462 2082 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 ATP9B-208ENST00000586722 1650 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 NT5C2-203ENST00000404739 3365 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AL080312.1-201ENST00000256654 824 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 OR11H4-201ENST00000315409 1082 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 CSN2-201ENST00000353151 1066 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 RNU1-47P-201ENST00000362966 163 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 RNU6-729P-201ENST00000384399 107 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 MS4A3-203ENST00000395032 867 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 PEX12P1-201ENST00000400284 1048 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AL049693.1-201ENST00000402760 611 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 EEF1A1P40-201ENST00000412883 573 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 CLEC1A-203ENST00000420265 1165 ntAPPRIS ALT2 TSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC002486.1-201ENST00000435098 391 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 ARPC3P1-201ENST00000437218 533 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 TRMT2B-AS1-201ENST00000443801 205 ntTSL 5 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AL133215.1-201ENST00000447344 342 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC079448.1-201ENST00000449377 373 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AL021154.1-201ENST00000451217 456 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 FABP3P2-201ENST00000453169 399 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 PCCA-AS1-203ENST00000455958 356 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 RN7SL608P-201ENST00000492377 279 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC084871.2-201ENST00000503355 464 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 NPY6R-201ENST00000503807 1112 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 SCARNA15.1-201ENST00000516384 125 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 Y_RNA.704-201ENST00000516851 102 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 IGKV2-36-201ENST00000519999 223 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC123788.1-201ENST00000526922 783 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AP003499.1-201ENST00000527217 574 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 CLEC4E-206ENST00000545274 730 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 HIGD1AP9-201ENST00000550710 279 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 SRSF5-206ENST00000554021 567 ntTSL 4 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC009118.1-201ENST00000566019 374 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 ZNF174-204ENST00000572544 1002 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AP001180.3-201ENST00000582221 145 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 HIGD1B-203ENST00000587021 457 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 RPL27-207ENST00000590864 569 ntTSL 2 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC011891.2-201ENST00000604949 397 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 RBM22P6-201ENST00000611682 867 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 FRG1KP-201ENST00000623592 341 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 AC099667.1-201ENST00000624222 469 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 MIR3662-201ENST00000637030 95 ntBASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 OR11H4-203ENST00000641525 1082 ntAPPRIS P1 BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 ELOVL5-201ENST00000304434 2827 ntAPPRIS P1 TSL 1 (best) BASIC7.2□□□□□ -1.26
DEPDC4Q8N2C3 TCF7L2-209ENST00000369395 1541 ntTSL 1 (best) BASIC7.2□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 88.4 ms