Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 AC007115.1-201ENST00000546853 234 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 LINC02303-204ENST00000555442 889 ntTSL 3 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 LINC02131-201ENST00000563289 419 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AC134669.1-201ENST00000581275 672 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AC026898.1-201ENST00000586404 571 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AP001981.2-201ENST00000603241 418 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AC064872.1-201ENST00000604823 1072 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AC139769.3-201ENST00000618383 175 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 OR1S1-201ENST00000624470 978 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 DRG1-207ENST00000629688 309 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 ZNF663P-202ENST00000641770 1131 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AL121936.2-201ENST00000641935 662 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 FAM208A-210ENST00000614531 3441 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 AL662795.2-201ENST00000624252 3706 ntBASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 ZNF426-202ENST00000535489 2375 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 ANGPT1-205ENST00000520052 1523 ntTSL 5 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC6.3□□□□□ -1.4
TRIM48Q8IWZ4 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 ERC2-214ENST00000612797 3831 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 IQCA1-202ENST00000309507 3155 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 SAGE3P-201ENST00000619800 1635 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC00907-201ENST00000585627 3324 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 OR2M1P-201ENST00000318104 951 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 ZNF92-201ENST00000328747 3210 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 CGA-201ENST00000369582 729 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 RNU6-413P-201ENST00000384115 107 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 ATP5HP3-201ENST00000396994 486 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 RPS3AP26-201ENST00000398259 784 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 RSL24D1P4-201ENST00000400938 484 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 NUDT19P3-201ENST00000404698 555 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 RN7SKP281-201ENST00000410472 352 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL445213.1-201ENST00000412589 747 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 RPL7AP14-201ENST00000424041 802 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 IFNNP1-201ENST00000429219 553 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC02522-201ENST00000431401 256 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL035458.1-201ENST00000433096 585 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL157827.1-201ENST00000447622 132 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 MTCO1P18-201ENST00000455518 1419 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 RN7SL552P-201ENST00000462094 276 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 MARK2P8-201ENST00000476069 952 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC025459.1-201ENST00000504072 156 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 MGST2-204ENST00000506797 634 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 HMGN1P16-201ENST00000508308 283 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 MTCO3P7-201ENST00000510008 774 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 RNA5SP441-201ENST00000516809 88 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL133399.1-201ENST00000527476 298 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 ZDHHC20P3-201ENST00000531576 336 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 NPIPB14P-203ENST00000532298 987 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC024405.1-201ENST00000532521 1042 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC244502.2-201ENST00000543361 851 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL356022.1-202ENST00000555433 379 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC067852.5-201ENST00000589299 310 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC098617.1-205ENST00000595918 1032 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 DTNA-228ENST00000597674 1732 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 Metazoa_SRP.35-201ENST00000611402 288 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 DPY19L1-208ENST00000612226 607 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC073569.3-201ENST00000619055 682 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 CASC22-202ENST00000628396 802 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL132640.3-201ENST00000630473 177 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 LINC01435-220ENST00000630847 714 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC245427.3-201ENST00000632041 51 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC062022.1-201ENST00000451026 1684 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AL390726.6-201ENST00000637760 1654 ntTSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 AC074141.1-201ENST00000588129 2995 ntBASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 USP50-203ENST00000532404 1386 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 ANKS1B-207ENST00000546960 1383 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
TRIM48Q8IWZ4 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC6.29□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms