Protein–RNA interactions for Protein: Q8IVM0

CCDC50, Coiled-coil domain-containing protein 50, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50Q8IVM0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AC022417.1-201ENST00000624768 1303 ntBASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 AC004784.1-201ENST00000635495 1833 ntTSL 5 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 CNTN5-207ENST00000527185 4303 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
CCDC50Q8IVM0 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 ZNF845-201ENST00000458035 4311 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 NEAT1-202ENST00000501122 22743 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 YES1P1-201ENST00000418510 1628 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 RN7SKP292-201ENST00000365522 317 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AL359643.1-201ENST00000404109 423 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 RNA5SP296-201ENST00000410523 111 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 SMC4P1-201ENST00000414479 527 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 COX5BP7-201ENST00000414780 274 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 RPL24P2-201ENST00000421023 475 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AL662874.1-201ENST00000426065 230 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC060234.3-201ENST00000430438 559 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 FGF12-202ENST00000430714 603 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 HMGN1P2-201ENST00000445197 310 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 EEF1B2P6-201ENST00000445713 673 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AL445665.1-202ENST00000452436 324 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC068489.1-201ENST00000453706 261 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 CREM-220ENST00000463314 964 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 SUMO2P4-201ENST00000504193 276 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC016559.2-201ENST00000510759 359 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC022140.1-201ENST00000511029 565 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 RN7SKP99-201ENST00000517028 307 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC040958.1-201ENST00000561102 201 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC016252.1-201ENST00000609721 474 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AL359742.1-201ENST00000622497 540 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 AC092375.1-202ENST00000639452 404 ntTSL 3 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 MIR193BHG-214ENST00000641765 509 ntBASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 ZNF347-202ENST00000452676 4553 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
CCDC50Q8IVM0 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 PDE4B-201ENST00000329654 3998 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC021242.1-201ENST00000507315 2035 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 IL1RAPL1-202ENST00000378993 3667 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 MARCH1-202ENST00000339875 2476 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 OBSCN-205ENST00000422127 24060 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 PLIN2-202ENST00000380464 655 ntTSL 2 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 TRAV35-201ENST00000390462 330 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 RPL21P67-201ENST00000402896 478 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 GAPDHP42-201ENST00000406848 981 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC099535.1-201ENST00000408928 371 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 RPS3P2-201ENST00000421346 701 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 RPL19P16-201ENST00000433839 588 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC090018.1-201ENST00000434369 367 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC245028.2-201ENST00000458673 253 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC068672.3-203ENST00000505166 311 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 MTND6P2-201ENST00000512226 524 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 CYCSP22-201ENST00000517555 339 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 OR11H3P-201ENST00000554547 982 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC012588.1-201ENST00000583852 358 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC012616.1-201ENST00000600294 197 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 XIST-210ENST00000602863 775 ntTSL 3 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AL096712.1-201ENST00000614561 159 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AC135068.5-201ENST00000624197 983 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 AL391117.1-201ENST00000640003 1186 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 CCDC26-201ENST00000446592 1721 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 OR55B1P-203ENST00000641518 2602 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 TRIM51GP-201ENST00000534741 1350 ntBASIC5.67□□□□□ -1.5
CCDC50Q8IVM0 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
CCDC50Q8IVM0 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.66□□□□□ -1.5
CCDC50Q8IVM0 Z83820.1-201ENST00000456978 1499 ntBASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms