Protein–RNA interactions for Protein: Q7Z3B4

NUP54, Nucleoporin p54, humanhuman

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54Q7Z3B4 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 GRAMD2B-210ENST00000511134 1577 ntTSL 2 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 GVINP1-202ENST00000531871 7271 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 NOSTRIN-201ENST00000317647 2294 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC015799.1-201ENST00000622996 3122 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 RNA5SP500-201ENST00000364486 119 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 S100G-201ENST00000380200 455 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 RNU6-152P-201ENST00000384037 107 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 BTF3P9-201ENST00000418784 283 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC034195.1-201ENST00000420000 559 ntTSL 4 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 RNGTTP1-201ENST00000420965 728 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 RPS3P2-201ENST00000421346 701 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 IPPKP1-201ENST00000422501 768 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AL356806.1-201ENST00000422524 916 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 PA2G4P6-201ENST00000438325 1197 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 SCAND3P1-201ENST00000439854 1060 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC015983.1-201ENST00000441577 373 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AL354710.1-201ENST00000453641 246 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 EIF4A2P4-201ENST00000458691 1196 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC006539.1-201ENST00000481419 501 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 NENFP3-201ENST00000503735 313 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC090568.1-201ENST00000509499 856 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC074255.1-201ENST00000511259 501 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 SNORA70.20-201ENST00000516848 126 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 LINC00967-201ENST00000517689 792 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 OR4V1P-201ENST00000525394 1140 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 OR10D4P-201ENST00000525892 951 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 NPM1P35-201ENST00000533043 868 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC007569.1-202ENST00000547282 303 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC126615.2-201ENST00000553003 515 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC012414.2-201ENST00000559474 187 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AL731537.2-201ENST00000561565 951 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 SSX4B-201ENST00000595235 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 SSX4-201ENST00000595689 1221 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC025857.2-201ENST00000602711 238 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC100767.2-201ENST00000604840 693 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AL133481.2-203ENST00000607558 139 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC015982.1-201ENST00000608113 465 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 NADK2-211ENST00000617628 744 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 AC145207.9-201ENST00000623802 325 ntBASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 ASAH1-224ENST00000636269 685 ntTSL 3 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 HELLS-204ENST00000371332 2675 ntTSL 5 BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
NUP54Q7Z3B4 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC5.34□□□□□ -1.56
NUP54Q7Z3B4 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUP54Q7Z3B4 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUP54Q7Z3B4 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.34□□□□□ -1.56
NUP54Q7Z3B4 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.56
NUP54Q7Z3B4 BACH1-201ENST00000286800 5669 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
NUP54Q7Z3B4 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 TENM1-202ENST00000422452 12891 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC092079.1-201ENST00000558620 1985 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC007996.1-201ENST00000620414 2821 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 USMG5-201ENST00000309579 364 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 MIR375-201ENST00000362103 64 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 RN7SKP15-201ENST00000364742 309 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 RNU6-225P-201ENST00000384613 103 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 RNU2-50P-201ENST00000410494 143 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 CACYBPP1-201ENST00000438592 684 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 RPL12P11-201ENST00000439970 501 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC144530.1-201ENST00000452862 555 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC093166.4-201ENST00000457867 318 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 LINC02339-201ENST00000472649 752 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC092546.1-202ENST00000505628 499 ntTSL 2 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 SCARNA6.1-201ENST00000516989 238 ntBASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 PIH1D2-208ENST00000532211 1103 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
NUP54Q7Z3B4 AC025419.1-207ENST00000546198 1072 ntTSL 3 BASIC5.33□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms