Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 LZTFL1-216ENST00000539217 4113 ntTSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 ALKAL2-201ENST00000344414 449 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 TSLP-201ENST00000344895 736 ntAPPRIS P2 TSL 1 (best) BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 TINAG-203ENST00000370869 782 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 RNA5SP187-201ENST00000384400 119 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 KRTAP3-1-201ENST00000391588 594 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 CHMP1B2P-201ENST00000399581 597 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 YWHAZP6-201ENST00000399764 738 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 Z86062.1-201ENST00000406773 777 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 RPL12P28-201ENST00000430852 489 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC069154.1-201ENST00000432914 542 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 RSL24D1P8-201ENST00000434442 492 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC092013.1-201ENST00000438795 332 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 ARMC4P1-201ENST00000438905 707 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AL691517.1-201ENST00000440833 1235 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 CUBNP2-201ENST00000443534 1139 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 APOOP2-201ENST00000461561 539 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 PPIAP21-201ENST00000464473 501 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AP002453.1-201ENST00000492327 668 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 RN7SL591P-201ENST00000496150 292 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC106864.1-201ENST00000510655 640 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 KHDC1P1-201ENST00000511053 508 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 TOMM22P4-201ENST00000511318 336 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 GAPDHP62-201ENST00000515313 990 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC016074.1-201ENST00000518339 636 ntTSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC027117.1-201ENST00000520646 667 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC026616.1-201ENST00000523157 525 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 OR4A43P-201ENST00000532938 908 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AL133481.2-201ENST00000538322 367 ntTSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC084824.2-201ENST00000548906 345 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AL049870.4-201ENST00000555741 486 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 ZNF322P1-201ENST00000568013 1209 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 TRIM37-212ENST00000584889 353 ntTSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 LAMTOR5-AS1-217ENST00000608152 407 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 LAMTOR5-AS1-227ENST00000609653 457 ntTSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC011472.4-201ENST00000615848 491 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 MIR6721-201ENST00000617181 87 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC090017.1-201ENST00000548612 1779 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 NAT1-203ENST00000517492 2280 ntAPPRIS P1 TSL 2 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 DSPP-201ENST00000282478 4281 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 CCDC178-209ENST00000579947 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AC021242.1-201ENST00000507315 2035 ntBASIC5.13□□□□□ -1.59
C11orf88Q6PI97 AL034370.1-201ENST00000397254 1590 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 POLE2-206ENST00000554396 1581 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 DGKH-210ENST00000628433 3449 ntTSL 2 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 NELL2-201ENST00000333837 2943 ntTSL 2 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 CDC42SE2-201ENST00000360515 3591 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 DLEU7-AS1-201ENST00000413510 1806 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 LINC01676-202ENST00000435253 1849 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 OR14C36-201ENST00000317861 939 ntAPPRIS P1 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 RN7SKP69-201ENST00000365390 305 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 RN7SKP281-201ENST00000410472 352 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 EIF4A1P3-201ENST00000411521 244 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 AL390036.1-201ENST00000419428 734 ntTSL 5 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 AC002127.1-201ENST00000421305 225 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 BX119321.1-201ENST00000428912 797 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 AC108479.1-201ENST00000431142 427 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 AL450384.1-201ENST00000433526 413 ntTSL 2 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 RPS20P1-201ENST00000434853 354 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 TPRKBP1-201ENST00000456243 481 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 AC092691.2-201ENST00000461787 803 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 ABCC13-202ENST00000463099 3842 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 CBX1-205ENST00000495350 550 ntTSL 2 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 AC005912.1-201ENST00000495392 255 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 AC106822.1-201ENST00000502647 526 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.12□□□□□ -1.59
C11orf88Q6PI97 RNA5SP441-201ENST00000516809 88 ntBASIC5.12□□□□□ -1.59
C11orf88Q6PI97 CCND2-AS2-201ENST00000537370 495 ntTSL 4 BASIC5.12□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms