Protein–RNA interactions for Protein: Q5SXM2

SNAPC4, snRNA-activating protein complex subunit 4, humanhuman

Predictions only

Length 1,469 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4Q5SXM2 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 AC016745.2-201ENST00000608834 3443 ntBASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 CEACAM5-202ENST00000398599 2451 ntAPPRIS ALT2 TSL 5 BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 AC011933.2-201ENST00000578539 2790 ntBASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 KARSP3-201ENST00000571212 1504 ntBASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 OR9G4-201ENST00000302957 984 ntBASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 AL159174.1-202ENST00000425588 442 ntTSL 3 BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 ARL6IP1P3-201ENST00000524544 560 ntBASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 AP002370.2-203ENST00000533101 576 ntTSL 4 BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 BNIP3P5-201ENST00000562290 498 ntBASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 AC125494.2-201ENST00000602431 657 ntBASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC8.5□□□□□ -1.05
SNAPC4Q5SXM2 ZNF969P-201ENST00000510345 2341 ntBASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 DHX40P1-201ENST00000588725 1412 ntBASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 TTC39B-208ENST00000512701 10483 ntAPPRIS P3 TSL 2 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 FOXP2-207ENST00000393494 2664 ntAPPRIS P2 TSL 5 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 RNA5-8SP7-201ENST00000363443 155 ntBASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AC100784.1-201ENST00000522790 310 ntBASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 MLECP1-201ENST00000615893 709 ntBASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AC073869.8-201ENST00000641806 335 ntBASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 VIP-202ENST00000367244 1584 ntAPPRIS P4 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 SAMMSON-226ENST00000642089 1582 ntBASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 OR52N5-202ENST00000641181 2778 ntAPPRIS P1 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 ERBB4-205ENST00000436443 12084 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 AP1G1-201ENST00000299980 6969 ntAPPRIS P3 TSL 1 (best) BASIC8.49□□□□□ -1.05
SNAPC4Q5SXM2 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 ZBTB34-202ENST00000373452 6528 ntAPPRIS P1 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 RIF1-201ENST00000243326 15003 ntAPPRIS P3 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 GAPVD1-203ENST00000312123 4320 ntAPPRIS ALT1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 BX323845.1-201ENST00000432417 179 ntBASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 OR7E125P-201ENST00000443450 846 ntBASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 AL354714.3-201ENST00000447284 493 ntBASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 AC091163.1-201ENST00000524012 605 ntTSL 4 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 AC098935.2-201ENST00000604222 466 ntBASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 AL121873.1-201ENST00000616013 524 ntBASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 MIR6830-201ENST00000636015 70 ntBASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 RRN3-202ENST00000327307 2039 ntTSL 2 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 KCNN3-205ENST00000618040 13057 ntTSL 5 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 RPTN-201ENST00000316073 3569 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 SPRYD4-201ENST00000338146 10779 ntAPPRIS P1 TSL 1 (best) BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.48□□□□□ -1.05
SNAPC4Q5SXM2 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 AC078842.2-201ENST00000447529 1835 ntTSL 2 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 LRIT3-201ENST00000327908 3781 ntTSL 2 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 OR10T1P-201ENST00000424327 947 ntBASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 AC073143.1-201ENST00000436316 395 ntBASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 AC122718.1-201ENST00000439448 744 ntBASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 FAM133DP-201ENST00000464802 691 ntBASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 OR52A4P-201ENST00000472867 958 ntBASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 AL353729.2-201ENST00000605859 1249 ntBASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 DDX6-208ENST00000620157 6152 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 MAMDC2-AS1-201ENST00000377178 1504 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 UNC80-201ENST00000272845 13440 ntTSL 5 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC8.47□□□□□ -1.05
SNAPC4Q5SXM2 MID1-209ENST00000453318 6393 ntAPPRIS P1 TSL 5 BASIC8.47□□□□□ -1.05
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms