Protein–RNA interactions for Protein: Q3LFD5

USP41, Putative ubiquitin carboxyl-terminal hydrolase 41, humanhuman

Predictions only

Length 358 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP41Q3LFD5 EIF4A2P3-201ENST00000525903 1055 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 AP001970.1-201ENST00000531681 701 ntTSL 3 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 TRDV3-201ENST00000535880 425 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AL513327.3-201ENST00000602618 469 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 MAPK10-350ENST00000641777 965 ntBASIC5.95□□□□□ -1.46
USP41Q3LFD5 FLRT3-202ENST00000378053 4776 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 RALYL-206ENST00000521376 1457 ntTSL 5 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 LINC01568-202ENST00000555721 1325 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
USP41Q3LFD5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
USP41Q3LFD5 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 ZNF160-203ENST00000429604 4336 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 IFT52-202ENST00000373039 1599 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 RNA5SP91-201ENST00000390902 119 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AL009179.1-201ENST00000406085 265 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 AL390774.1-201ENST00000411924 246 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 NANOGP4-201ENST00000427230 913 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 MTCO1P57-201ENST00000432182 261 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 CLUHP1-201ENST00000435012 1190 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC005532.2-201ENST00000467154 373 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC004815.1-201ENST00000484185 331 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 RPS7P6-201ENST00000485777 579 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 RN7SL447P-201ENST00000494711 245 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC026688.1-201ENST00000520639 1168 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AL731537.2-201ENST00000561565 951 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC022916.2-201ENST00000590144 559 ntTSL 4 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC100775.1-201ENST00000590942 522 ntTSL 3 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AL133481.2-203ENST00000607558 139 ntBASIC5.94□□□□□ -1.46
USP41Q3LFD5 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 ALG2-202ENST00000319033 1627 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 KIN-201ENST00000379562 6348 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 WDYHV1-208ENST00000523984 1491 ntTSL 2 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AL023755.1-201ENST00000441851 1801 ntTSL 2 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 ZNF780A-205ENST00000594395 2044 ntAPPRIS ALT2 TSL 2 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 PSG1-202ENST00000312439 1882 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 FTO-203ENST00000460382 1517 ntTSL 5 BASIC5.94□□□□□ -1.46
USP41Q3LFD5 AC021092.1-201ENST00000592946 3199 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
USP41Q3LFD5 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 ZNF615-201ENST00000376716 4048 ntAPPRIS P3 TSL 2 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC004158.1-201ENST00000564508 4319 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 ZNF850-202ENST00000591344 7714 ntAPPRIS P3 TSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC005294.1-201ENST00000355509 281 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 GPR52-201ENST00000367685 1088 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 PEX12P1-201ENST00000400284 1048 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AP000221.1-201ENST00000419694 1046 ntTSL 3 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 NDUFA5P1-201ENST00000433858 341 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 EEF1B2P5-201ENST00000444820 548 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 RPS26P41-201ENST00000450370 284 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 SBDSP1-204ENST00000453858 737 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 RPL37AP8-201ENST00000494116 276 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC072052.1-201ENST00000496556 306 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC104997.1-201ENST00000519761 717 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC139697.1-201ENST00000548429 745 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AC126177.5-201ENST00000549599 178 ntBASIC5.93□□□□□ -1.46
USP41Q3LFD5 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.93□□□□□ -1.46
USP41Q3LFD5 GS1-279B7.1-203ENST00000565520 609 ntTSL 5 BASIC5.93□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms