Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 AC079776.5-201ENST00000641920 211 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC005005.4-201ENST00000623789 16698 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AC114774.1-201ENST00000507410 1770 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AL121950.1-201ENST00000624993 2077 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 TOP2B-201ENST00000264331 5358 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC4.72□□□□□ -1.65
CX3CL1P78423 AC004158.1-201ENST00000564508 4319 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 AP001284.1-201ENST00000528393 2118 ntBASIC4.72□□□□□ -1.65
CX3CL1P78423 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
CX3CL1P78423 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
CX3CL1P78423 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.65
CX3CL1P78423 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC125336.1-201ENST00000508893 2827 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 PTPRC-209ENST00000442510 5164 ntAPPRIS P4 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CL1P78423 RNASE2-201ENST00000304625 755 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CX3CL1P78423 SELENOWP1-201ENST00000322792 252 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 SNORA5.1-201ENST00000384275 131 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 MIR620-201ENST00000385232 95 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 HMGB1P10-201ENST00000395823 563 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 RPL5P19-201ENST00000404228 893 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC069282.1-201ENST00000411911 526 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 GAPDHP34-201ENST00000432112 823 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC069154.1-201ENST00000432914 542 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AL445928.1-201ENST00000435545 222 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CL1P78423 TUBB4BP6-201ENST00000437576 479 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 ATP6V1E1P1-201ENST00000439215 681 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 BMS1P10-201ENST00000443754 1120 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AKR1C2-203ENST00000455190 1098 ntTSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AL603882.1-201ENST00000463059 681 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC037198.2-201ENST00000478845 733 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 RN7SL741P-201ENST00000482473 289 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 RN7SL170P-201ENST00000487098 295 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 TRBV5-2-201ENST00000489095 273 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 NPM1P28-201ENST00000492269 840 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC112518.2-201ENST00000508565 425 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC121161.1-201ENST00000510606 652 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC108120.2-201ENST00000512973 294 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 MTCO3P27-201ENST00000514397 196 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 IGKV1OR22-1-201ENST00000521497 360 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC087897.2-201ENST00000552639 678 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC009396.1-201ENST00000553628 1079 ntTSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 CYCSP38-201ENST00000559840 322 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC007346.2-201ENST00000564816 892 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC126323.3-201ENST00000565136 564 ntTSL 4 BASIC4.71□□□□□ -1.66
CX3CL1P78423 MIR4271-201ENST00000582451 67 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 TTN-AS1-226ENST00000588716 604 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC060780.2-201ENST00000589047 198 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC002069.2-201ENST00000603580 883 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC011458.1-201ENST00000604034 617 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 SUMO2P14-201ENST00000604488 293 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC026741.1-201ENST00000605892 482 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC025175.1-201ENST00000606482 759 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 LINC02340-201ENST00000610335 626 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AL445670.1-201ENST00000618889 801 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC021106.3-201ENST00000623925 531 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 AC092329.4-204ENST00000639327 549 ntTSL 4 BASIC4.71□□□□□ -1.66
CX3CL1P78423 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC4.71□□□□□ -1.66
CX3CL1P78423 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 HUWE1-214ENST00000612484 14311 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CL1P78423 AC130304.1-201ENST00000622942 2385 ntBASIC4.71□□□□□ -1.66
CX3CL1P78423 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC4.71□□□□□ -1.66
CX3CL1P78423 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC4.71□□□□□ -1.66
CX3CL1P78423 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.71□□□□□ -1.66
CX3CL1P78423 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 CRYZ-204ENST00000370872 1592 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 LINC01520-201ENST00000441457 1487 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 SLC10A7-202ENST00000394059 1730 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.7□□□□□ -1.66
CX3CL1P78423 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 LYPD6B-201ENST00000280115 1100 ntAPPRIS ALT2 TSL 5 BASIC4.7□□□□□ -1.66
CX3CL1P78423 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 WFDC8-202ENST00000357199 1268 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CX3CL1P78423 RN7SKP81-201ENST00000365603 331 ntBASIC4.7□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 107.8 ms