Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC093673.2-201ENST00000609674 331 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AC245100.7-201ENST00000609678 442 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AC245014.3-201ENST00000618589 347 ntBASIC5.53□□□□□ -1.52
RAE1P78406 AC025262.3-201ENST00000623666 360 ntBASIC5.53□□□□□ -1.52
RAE1P78406 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC5.53□□□□□ -1.52
RAE1P78406 AL158152.1-201ENST00000602652 1435 ntBASIC5.53□□□□□ -1.52
RAE1P78406 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 AC007557.3-201ENST00000418591 3135 ntTSL 2 BASIC5.53□□□□□ -1.52
RAE1P78406 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
RAE1P78406 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
RAE1P78406 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 RGSL1-201ENST00000294854 3696 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC5.53□□□□□ -1.52
RAE1P78406 AMZ2-206ENST00000577985 2257 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 AC232271.1-201ENST00000602455 2715 ntBASIC5.53□□□□□ -1.52
RAE1P78406 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
RAE1P78406 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 SEM1-202ENST00000356686 2667 ntTSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 AC027088.4-201ENST00000611559 1947 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AP002001.1-201ENST00000526101 1759 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAE1P78406 AC012078.1-201ENST00000405035 1646 ntBASIC5.52□□□□□ -1.53
RAE1P78406 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAE1P78406 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC5.52□□□□□ -1.53
RAE1P78406 AC011503.1-201ENST00000596326 1585 ntTSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAE1P78406 PRIM2-201ENST00000274891 864 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAE1P78406 OR4S2-201ENST00000312422 936 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RAE1P78406 OR56A4-201ENST00000330728 1209 ntBASIC5.52□□□□□ -1.53
RAE1P78406 TYRP1-201ENST00000381136 872 ntTSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 Z68694.1-201ENST00000413929 841 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AL445183.3-201ENST00000414168 502 ntBASIC5.52□□□□□ -1.53
RAE1P78406 GTF2IP5-201ENST00000414608 731 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AC008173.1-201ENST00000418901 264 ntBASIC5.52□□□□□ -1.53
RAE1P78406 BX284632.2-201ENST00000421091 399 ntBASIC5.52□□□□□ -1.53
RAE1P78406 ZNF736P7Y-201ENST00000425158 820 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAE1P78406 DEFA9P-201ENST00000433042 285 ntBASIC5.52□□□□□ -1.53
RAE1P78406 ATP6V1E1P1-201ENST00000439215 681 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AL512605.1-202ENST00000441919 381 ntBASIC5.52□□□□□ -1.53
RAE1P78406 RPL5P10-201ENST00000445207 894 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AL359955.2-201ENST00000445380 353 ntBASIC5.52□□□□□ -1.53
RAE1P78406 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.52□□□□□ -1.53
RAE1P78406 RNU1-88P-201ENST00000459274 128 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AC005165.2-201ENST00000466070 380 ntBASIC5.52□□□□□ -1.53
RAE1P78406 LINC02006-201ENST00000488210 524 ntTSL 4 BASIC5.52□□□□□ -1.53
RAE1P78406 AC020699.1-201ENST00000505161 445 ntBASIC5.52□□□□□ -1.53
RAE1P78406 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 RFESD-208ENST00000513950 464 ntTSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 RNU6-276P-201ENST00000516114 96 ntBASIC5.52□□□□□ -1.53
RAE1P78406 RN7SKP287-201ENST00000516546 266 ntBASIC5.52□□□□□ -1.53
RAE1P78406 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC5.52□□□□□ -1.53
RAE1P78406 AP001207.2-201ENST00000519490 539 ntBASIC5.52□□□□□ -1.53
RAE1P78406 MTND2P38-201ENST00000522536 667 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AC136777.2-201ENST00000522979 358 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AP003080.1-202ENST00000526526 915 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC5.52□□□□□ -1.53
RAE1P78406 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 AL132857.1-201ENST00000555180 708 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AC007956.1-201ENST00000555623 542 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.52□□□□□ -1.53
RAE1P78406 CYCSP38-201ENST00000559840 322 ntBASIC5.52□□□□□ -1.53
RAE1P78406 U95743.1-201ENST00000573369 1001 ntTSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.52□□□□□ -1.53
RAE1P78406 SNX6P1-201ENST00000601728 1224 ntBASIC5.52□□□□□ -1.53
RAE1P78406 HIRAP1-201ENST00000605318 787 ntBASIC5.52□□□□□ -1.53
RAE1P78406 MIR6793-201ENST00000612376 63 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 AC105105.5-201ENST00000622635 1294 ntBASIC5.52□□□□□ -1.53
RAE1P78406 RPL23AP61-201ENST00000623642 466 ntBASIC5.52□□□□□ -1.53
RAE1P78406 AC006963.1-201ENST00000624003 1052 ntBASIC5.52□□□□□ -1.53
RAE1P78406 LINC00506-201ENST00000628435 525 ntTSL 4 BASIC5.52□□□□□ -1.53
RAE1P78406 AC245187.2-201ENST00000631520 475 ntTSL 3 BASIC5.52□□□□□ -1.53
RAE1P78406 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RAE1P78406 CYLD-201ENST00000311559 5371 ntTSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RAE1P78406 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAE1P78406 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RAE1P78406 LYARP1-201ENST00000436977 1501 ntBASIC5.52□□□□□ -1.53
RAE1P78406 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
RAE1P78406 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RAE1P78406 MEMO1-202ENST00000379383 1498 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RAE1P78406 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAE1P78406 AC009962.1-201ENST00000567327 3813 ntBASIC5.51□□□□□ -1.53
RAE1P78406 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC5.51□□□□□ -1.53
RAE1P78406 GTF2H5-201ENST00000607778 7481 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAE1P78406 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAE1P78406 IFI16-204ENST00000368131 2734 ntAPPRIS P3 TSL 1 (best) BASIC5.51□□□□□ -1.53
RAE1P78406 AC004076.2-201ENST00000620532 3323 ntBASIC5.51□□□□□ -1.53
RAE1P78406 RPL6-201ENST00000202773 947 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 107 ms