Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
CCNA1P78396 FCGR3B-208ENST00000613418 2251 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.19□□□□□ -1.42
CCNA1P78396 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC6.19□□□□□ -1.42
CCNA1P78396 AP001284.1-201ENST00000528393 2118 ntBASIC6.19□□□□□ -1.42
CCNA1P78396 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.19□□□□□ -1.42
CCNA1P78396 AC093297.3-201ENST00000607056 2517 ntBASIC6.19□□□□□ -1.42
CCNA1P78396 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNA1P78396 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.18□□□□□ -1.42
CCNA1P78396 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 DCN-204ENST00000425043 1438 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC6.18□□□□□ -1.42
CCNA1P78396 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNA1P78396 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 AC136624.1-201ENST00000400791 413 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 PRR21-201ENST00000408934 1170 ntAPPRIS P1 BASIC6.18□□□□□ -1.42
CCNA1P78396 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.18□□□□□ -1.42
CCNA1P78396 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 AC091685.1-201ENST00000442436 448 ntTSL 3 BASIC6.18□□□□□ -1.42
CCNA1P78396 IGBP1P3-201ENST00000447449 1000 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 RPL12P39-201ENST00000455456 496 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 AC009127.1-201ENST00000467090 155 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 PDCL3P4-201ENST00000489621 720 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.18□□□□□ -1.42
CCNA1P78396 AC105420.1-201ENST00000504389 582 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 GTF2F2P1-201ENST00000511083 675 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 AC109464.1-201ENST00000511091 819 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 AP004607.2-201ENST00000533949 322 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 FAM222A-AS1-202ENST00000541460 751 ntTSL 4 BASIC6.18□□□□□ -1.42
CCNA1P78396 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC6.18□□□□□ -1.42
CCNA1P78396 CR383656.6-201ENST00000550518 394 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 AC090286.3-201ENST00000573133 187 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 MIR3934-201ENST00000579806 107 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 MIR4480-201ENST00000582492 71 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 XIST-210ENST00000602863 775 ntTSL 3 BASIC6.18□□□□□ -1.42
CCNA1P78396 LSM1P2-201ENST00000604911 322 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 AC010809.3-201ENST00000621310 641 ntBASIC6.18□□□□□ -1.42
CCNA1P78396 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNA1P78396 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.18□□□□□ -1.42
CCNA1P78396 ATF2-212ENST00000426833 4132 ntAPPRIS P1 TSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 MACF1-232ENST00000567887 24319 ntAPPRIS P5 TSL 5 BASIC6.18□□□□□ -1.42
CCNA1P78396 LINC01361-202ENST00000452834 1526 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.18□□□□□ -1.42
CCNA1P78396 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC6.18□□□□□ -1.42
CCNA1P78396 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.18□□□□□ -1.42
CCNA1P78396 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.18□□□□□ -1.42
CCNA1P78396 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCNA1P78396 AL158152.1-201ENST00000602652 1435 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 HSPD1P7-201ENST00000447985 1686 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 SENP8-202ENST00000542035 1672 ntAPPRIS P1 TSL 2 BASIC6.17□□□□□ -1.42
CCNA1P78396 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC6.17□□□□□ -1.42
CCNA1P78396 G3BP1-202ENST00000394123 10240 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCNA1P78396 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCNA1P78396 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC6.17□□□□□ -1.42
CCNA1P78396 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCNA1P78396 RNU1-59P-201ENST00000364829 162 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 MIR105-1-201ENST00000385222 81 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 OR4K12P-201ENST00000406538 961 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 RPL7P56-201ENST00000429441 717 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 Z80107.2-201ENST00000445127 392 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 LINC01456-201ENST00000453902 708 ntTSL 3 BASIC6.17□□□□□ -1.42
CCNA1P78396 LINC02224-201ENST00000505706 584 ntTSL 4 BASIC6.17□□□□□ -1.42
CCNA1P78396 AC108043.1-201ENST00000512696 574 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 AC004980.4-201ENST00000513375 203 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC6.17□□□□□ -1.42
CCNA1P78396 AP003080.1-202ENST00000526526 915 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 BRD9P1-201ENST00000529855 560 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.17□□□□□ -1.42
CCNA1P78396 YWHABP2-201ENST00000540201 713 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 AC009597.2-201ENST00000604659 592 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 U1.25-201ENST00000614085 162 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 U1.34-201ENST00000618578 162 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 U1.31-201ENST00000620022 160 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC6.17□□□□□ -1.42
CCNA1P78396 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCNA1P78396 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC6.17□□□□□ -1.42
CCNA1P78396 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
CCNA1P78396 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.17□□□□□ -1.42
CCNA1P78396 AC005225.5-201ENST00000623547 2225 ntBASIC6.17□□□□□ -1.42
CCNA1P78396 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
CCNA1P78396 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC6.16□□□□□ -1.42
CCNA1P78396 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCNA1P78396 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
CCNA1P78396 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.16□□□□□ -1.42
CCNA1P78396 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.16□□□□□ -1.42
CCNA1P78396 UNC5C-205ENST00000610318 9403 ntTSL 5 BASIC6.16□□□□□ -1.42
CCNA1P78396 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
CCNA1P78396 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
CCNA1P78396 RPSAP35-201ENST00000413753 818 ntBASIC6.16□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 74.7 ms