Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC5.22□□□□□ -1.57
PKNOX1P55347 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 AL035090.1-201ENST00000454835 332 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 RPL15P21-201ENST00000495592 567 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 HMGB1P44-201ENST00000508597 572 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AC109481.1-201ENST00000509173 282 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AC140125.1-201ENST00000515739 684 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 TMEM97P2-201ENST00000517841 403 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC5.22□□□□□ -1.57
PKNOX1P55347 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC5.22□□□□□ -1.57
PKNOX1P55347 AC024405.1-201ENST00000532521 1042 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AP001266.2-201ENST00000534505 464 ntTSL 4 BASIC5.22□□□□□ -1.57
PKNOX1P55347 AL049872.1-201ENST00000556323 322 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AC015849.6-201ENST00000605454 474 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
PKNOX1P55347 AL096712.1-201ENST00000614561 159 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AC008115.3-201ENST00000614874 549 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKNOX1P55347 MIR6839-201ENST00000620425 113 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 AC005972.4-201ENST00000636248 1131 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 IGLV10-54-202ENST00000640991 351 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 AC133552.1-201ENST00000569988 4007 ntBASIC5.22□□□□□ -1.57
PKNOX1P55347 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKNOX1P55347 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
PKNOX1P55347 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
PKNOX1P55347 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC5.21□□□□□ -1.57
PKNOX1P55347 C2orf66-201ENST00000342506 1669 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PKNOX1P55347 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.57
PKNOX1P55347 BMPR1APS1-201ENST00000403332 1598 ntBASIC5.21□□□□□ -1.57
PKNOX1P55347 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.21□□□□□ -1.57
PKNOX1P55347 CCNB3-201ENST00000276014 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
PKNOX1P55347 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC5.21□□□□□ -1.58
PKNOX1P55347 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 EDA2R-202ENST00000374719 3418 ntAPPRIS P3 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 CASC17-201ENST00000569074 2059 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 PKIB-203ENST00000368446 556 ntTSL 2 BASIC5.21□□□□□ -1.58
PKNOX1P55347 LINC00396-201ENST00000411690 439 ntTSL 3 BASIC5.21□□□□□ -1.58
PKNOX1P55347 CTSL3P-202ENST00000412179 788 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 SLC20A1P1-201ENST00000413906 956 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 AL596448.1-201ENST00000415024 392 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 BMS1P17-202ENST00000416720 316 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC5.21□□□□□ -1.58
PKNOX1P55347 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC5.21□□□□□ -1.58
PKNOX1P55347 NPM1P48-201ENST00000436002 853 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 FMO7P-201ENST00000436045 768 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC5.21□□□□□ -1.58
PKNOX1P55347 AC019185.1-201ENST00000442718 389 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC5.21□□□□□ -1.58
PKNOX1P55347 DNAJB5P1-201ENST00000454004 806 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 PEX5L-AS1-201ENST00000466064 827 ntTSL 2 BASIC5.21□□□□□ -1.58
PKNOX1P55347 CBX1P5-201ENST00000475330 559 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC5.21□□□□□ -1.58
PKNOX1P55347 AC023424.1-201ENST00000496058 459 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 RN7SL649P-201ENST00000496974 275 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 NIFKP7-201ENST00000503365 834 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 AC138409.2-202ENST00000507274 458 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 NANOGNBP2-201ENST00000544753 553 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 AC107958.1-201ENST00000556576 290 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC5.21□□□□□ -1.58
PKNOX1P55347 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC5.21□□□□□ -1.58
PKNOX1P55347 AC005341.1-201ENST00000571086 708 ntBASIC5.21□□□□□ -1.58
PKNOX1P55347 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC5.21□□□□□ -1.58
PKNOX1P55347 LINC01835-202ENST00000589345 450 ntTSL 3 BASIC5.21□□□□□ -1.58
PKNOX1P55347 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC5.21□□□□□ -1.58
PKNOX1P55347 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 IKZF3-213ENST00000439167 1879 ntTSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PKNOX1P55347 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC5.21□□□□□ -1.58
PKNOX1P55347 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 FAM46D-202ENST00000538312 3106 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.58
PKNOX1P55347 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.21□□□□□ -1.58
PKNOX1P55347 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.21□□□□□ -1.58
PKNOX1P55347 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.2□□□□□ -1.58
PKNOX1P55347 EYA1-203ENST00000388740 3788 ntTSL 5 BASIC5.2□□□□□ -1.58
PKNOX1P55347 AC021205.3-201ENST00000609680 1709 ntTSL 3 BASIC5.2□□□□□ -1.58
PKNOX1P55347 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKNOX1P55347 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.2□□□□□ -1.58
PKNOX1P55347 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKNOX1P55347 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
PKNOX1P55347 CASP1-208ENST00000527979 1521 ntTSL 5 BASIC5.2□□□□□ -1.58
PKNOX1P55347 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PKNOX1P55347 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
PKNOX1P55347 OR7E156P-201ENST00000400303 464 ntBASIC5.2□□□□□ -1.58
PKNOX1P55347 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.2□□□□□ -1.58
PKNOX1P55347 Z93019.1-201ENST00000416450 973 ntBASIC5.2□□□□□ -1.58
PKNOX1P55347 AL121878.1-201ENST00000418638 859 ntBASIC5.2□□□□□ -1.58
PKNOX1P55347 AC023347.1-202ENST00000419223 440 ntTSL 5 BASIC5.2□□□□□ -1.58
PKNOX1P55347 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
PKNOX1P55347 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.2□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 132.4 ms