Protein–RNA interactions for Protein: P55287

CDH11, Cadherin-11, humanhuman

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH11P55287 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 RPS17P5-201ENST00000498293 408 ntBASIC5.16□□□□□ -1.58
CDH11P55287 SETP12-201ENST00000514068 805 ntBASIC5.16□□□□□ -1.58
CDH11P55287 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 NSMCE2-210ENST00000522563 1037 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
CDH11P55287 OR4A17P-201ENST00000526032 904 ntBASIC5.16□□□□□ -1.58
CDH11P55287 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH11P55287 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH11P55287 AC084036.1-201ENST00000609190 508 ntBASIC5.16□□□□□ -1.58
CDH11P55287 Z95327.3-201ENST00000610385 572 ntBASIC5.16□□□□□ -1.58
CDH11P55287 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH11P55287 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC5.16□□□□□ -1.58
CDH11P55287 AC021766.1-201ENST00000624404 741 ntBASIC5.16□□□□□ -1.58
CDH11P55287 AC080188.3-201ENST00000624842 748 ntBASIC5.16□□□□□ -1.58
CDH11P55287 AL138960.2-201ENST00000625145 535 ntBASIC5.16□□□□□ -1.58
CDH11P55287 ZNF347-201ENST00000334197 7960 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 MTCO1P7-201ENST00000419523 1542 ntBASIC5.16□□□□□ -1.58
CDH11P55287 AC098679.1-203ENST00000505532 2227 ntTSL 2 BASIC5.16□□□□□ -1.58
CDH11P55287 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.16□□□□□ -1.58
CDH11P55287 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC5.16□□□□□ -1.58
CDH11P55287 BAZ2B-203ENST00000392782 8058 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
CDH11P55287 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH11P55287 AC098798.1-201ENST00000503998 1447 ntTSL 5 BASIC5.15□□□□□ -1.58
CDH11P55287 AC106872.5-201ENST00000508856 1416 ntBASIC5.15□□□□□ -1.58
CDH11P55287 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.15□□□□□ -1.58
CDH11P55287 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
CDH11P55287 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH11P55287 AC020633.1-201ENST00000468439 2247 ntBASIC5.15□□□□□ -1.58
CDH11P55287 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC5.15□□□□□ -1.58
CDH11P55287 TRIQK-223ENST00000537541 3510 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.58
CDH11P55287 ADAMDEC1-204ENST00000522298 2044 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
CDH11P55287 LIX1-AS1-201ENST00000504578 1793 ntTSL 5 BASIC5.15□□□□□ -1.58
CDH11P55287 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
CDH11P55287 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH11P55287 AL121886.1-201ENST00000358609 435 ntBASIC5.15□□□□□ -1.59
CDH11P55287 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH11P55287 AC016739.1-201ENST00000405359 345 ntBASIC5.15□□□□□ -1.59
CDH11P55287 RPS3AP2-201ENST00000407190 754 ntBASIC5.15□□□□□ -1.59
CDH11P55287 GPS2P1-201ENST00000411761 986 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AC098592.2-201ENST00000413158 265 ntBASIC5.15□□□□□ -1.59
CDH11P55287 CDY17P-201ENST00000414121 1282 ntBASIC5.15□□□□□ -1.59
CDH11P55287 RPL35AP3-201ENST00000414680 288 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AC007389.1-203ENST00000414811 556 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH11P55287 TRIM60P17-201ENST00000415181 719 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 GNG5P5-201ENST00000420444 220 ntBASIC5.15□□□□□ -1.59
CDH11P55287 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 AL391704.3-201ENST00000425365 831 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH11P55287 AC009784.1-201ENST00000426484 460 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AC010737.1-201ENST00000426699 559 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH11P55287 AC126120.1-201ENST00000431082 470 ntBASIC5.15□□□□□ -1.59
CDH11P55287 ZNF736P1Y-201ENST00000440402 1276 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AL691517.1-201ENST00000440833 1235 ntBASIC5.15□□□□□ -1.59
CDH11P55287 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 AL353718.1-201ENST00000451028 517 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AL445665.1-202ENST00000452436 324 ntBASIC5.15□□□□□ -1.59
CDH11P55287 RN7SL269P-201ENST00000467795 305 ntBASIC5.15□□□□□ -1.59
CDH11P55287 RPSAP37-201ENST00000470913 821 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AC092590.1-201ENST00000471672 737 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH11P55287 UBFD1P1-201ENST00000473259 814 ntBASIC5.15□□□□□ -1.59
CDH11P55287 EFCAB10-203ENST00000480514 740 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH11P55287 RN7SL57P-201ENST00000493687 290 ntBASIC5.15□□□□□ -1.59
CDH11P55287 RN7SL101P-201ENST00000496350 279 ntBASIC5.15□□□□□ -1.59
CDH11P55287 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH11P55287 AC011411.1-201ENST00000509592 876 ntBASIC5.15□□□□□ -1.59
CDH11P55287 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
CDH11P55287 AC090155.1-201ENST00000520800 407 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH11P55287 AC112191.2-201ENST00000522428 333 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH11P55287 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH11P55287 AC139697.1-201ENST00000548429 745 ntBASIC5.15□□□□□ -1.59
CDH11P55287 AC009396.2-201ENST00000555954 700 ntTSL 3 BASIC5.15□□□□□ -1.59
CDH11P55287 LINC00557-201ENST00000563184 1279 ntBASIC5.15□□□□□ -1.59
CDH11P55287 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 AC099850.2-201ENST00000577660 557 ntAPPRIS P1 TSL 3 BASIC5.15□□□□□ -1.59
CDH11P55287 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.15□□□□□ -1.59
CDH11P55287 SMARCA2-231ENST00000634931 939 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC5.15□□□□□ -1.59
CDH11P55287 AP002008.2-205ENST00000637111 1091 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 CCDC195-201ENST00000638102 606 ntAPPRIS P1 TSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH11P55287 AC004158.1-201ENST00000564508 4319 ntBASIC5.15□□□□□ -1.59
CDH11P55287 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC5.15□□□□□ -1.59
CDH11P55287 ZNF420-202ENST00000337995 3535 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH11P55287 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
CDH11P55287 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC5.15□□□□□ -1.59
CDH11P55287 GCSAML-201ENST00000366488 3820 ntAPPRIS P3 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH11P55287 PTBP3-207ENST00000458258 7995 ntTSL 1 (best) BASIC5.14□□□□□ -1.59
CDH11P55287 OR4F13P-202ENST00000560066 2054 ntBASIC5.14□□□□□ -1.59
CDH11P55287 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.14□□□□□ -1.59
CDH11P55287 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC5.14□□□□□ -1.59
CDH11P55287 RNU4-39P-201ENST00000362455 127 ntBASIC5.14□□□□□ -1.59
CDH11P55287 RNU1-150P-201ENST00000362491 162 ntBASIC5.14□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 114 ms