Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC114786.1-201ENST00000512892 1415 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 MAPRE2-211ENST00000589699 4080 ntAPPRIS ALT1 TSL 2 BASIC5.72□□□□□ -1.49
LIMK1P53667 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC5.72□□□□□ -1.49
LIMK1P53667 EEF1A1P30-201ENST00000429708 1315 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 KYNUP3-201ENST00000574386 1341 ntBASIC5.72□□□□□ -1.49
LIMK1P53667 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
LIMK1P53667 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC5.72□□□□□ -1.49
LIMK1P53667 ZNF227-208ENST00000589005 2943 ntTSL 2 BASIC5.71□□□□□ -1.49
LIMK1P53667 AC093671.1-201ENST00000624981 2929 ntBASIC5.71□□□□□ -1.49
LIMK1P53667 OSBPL9P1-201ENST00000604744 1469 ntBASIC5.71□□□□□ -1.49
LIMK1P53667 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC5.71□□□□□ -1.49
LIMK1P53667 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LIMK1P53667 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
LIMK1P53667 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
LIMK1P53667 MAPK10-297ENST00000641287 3725 ntAPPRIS P2 BASIC5.71□□□□□ -1.49
LIMK1P53667 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK1P53667 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK1P53667 TRIM51GP-201ENST00000534741 1350 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AC015799.1-201ENST00000622996 3122 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AL121768.1-201ENST00000613917 2544 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LIMK1P53667 AC005294.1-201ENST00000355509 281 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 OR10R3P-201ENST00000361688 942 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 RNA5SP305-201ENST00000362665 119 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 RNU6-697P-201ENST00000363348 107 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 RNA5SP234-201ENST00000363916 119 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 RNU6-819P-201ENST00000364116 107 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 RNU11-6P-201ENST00000391127 133 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK1P53667 RN7SKP151-201ENST00000410230 316 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 RPL35AP24-201ENST00000413846 330 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AL133325.1-201ENST00000421090 382 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK1P53667 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK1P53667 AC004994.1-201ENST00000447057 313 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK1P53667 RPS23P9-201ENST00000448848 438 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AURKAPS1-201ENST00000451805 1212 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AC104164.1-201ENST00000460282 590 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 PGAM1P13-201ENST00000507497 754 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AC010387.1-201ENST00000507526 487 ntTSL 2 BASIC5.71□□□□□ -1.5
LIMK1P53667 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK1P53667 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK1P53667 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK1P53667 SNORA70.17-201ENST00000516449 133 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AC136777.2-201ENST00000522979 358 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AC087477.5-202ENST00000560242 389 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK1P53667 NPM1P42-201ENST00000560329 862 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK1P53667 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC5.71□□□□□ -1.5
LIMK1P53667 AC119403.2-201ENST00000590960 598 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 AL353729.2-201ENST00000605859 1249 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK1P53667 LEPROT-206ENST00000613538 4625 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK1P53667 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC5.71□□□□□ -1.5
LIMK1P53667 F13B-201ENST00000367412 2217 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
LIMK1P53667 ZNF733P-202ENST00000444809 1573 ntBASIC5.71□□□□□ -1.5
LIMK1P53667 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
LIMK1P53667 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC5.71□□□□□ -1.5
LIMK1P53667 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
LIMK1P53667 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.7□□□□□ -1.5
LIMK1P53667 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 NRDC-213ENST00000539524 3417 ntAPPRIS ALT2 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK1P53667 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK1P53667 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC5.7□□□□□ -1.5
LIMK1P53667 FCHSD2-201ENST00000311172 4340 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 LEPR-208ENST00000616738 5081 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK1P53667 RLN1-201ENST00000223862 967 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 AL353625.1-202ENST00000366273 571 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 NPM1P10-201ENST00000398310 865 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC5.7□□□□□ -1.5
LIMK1P53667 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC5.7□□□□□ -1.5
LIMK1P53667 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK1P53667 AJ239321.1-201ENST00000424255 564 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 FRMPD4-AS1-201ENST00000425057 285 ntTSL 3 BASIC5.7□□□□□ -1.5
LIMK1P53667 AC016027.5-201ENST00000427227 210 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 OR52B5P-201ENST00000435337 951 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
LIMK1P53667 CUBNP2-201ENST00000443534 1139 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC5.7□□□□□ -1.5
LIMK1P53667 AP003774.4-201ENST00000447028 672 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK1P53667 RAB28P2-201ENST00000454299 641 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 RPL7P45-201ENST00000455851 743 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 GYG1P1-201ENST00000460864 698 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 RPS4XP1-201ENST00000482189 787 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 LYRM4-208ENST00000500576 592 ntTSL 2 BASIC5.7□□□□□ -1.5
LIMK1P53667 CYP4F27P-201ENST00000514557 494 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 SCARNA6.1-201ENST00000516989 238 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 GSTP1P1-201ENST00000548078 319 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.7□□□□□ -1.5
LIMK1P53667 AC067805.1-201ENST00000559344 470 ntBASIC5.7□□□□□ -1.5
LIMK1P53667 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC5.7□□□□□ -1.5
LIMK1P53667 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC5.7□□□□□ -1.5
LIMK1P53667 AC027334.1-201ENST00000603257 310 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms