Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
HCFC1P51610 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC4.77□□□□□ -1.65
HCFC1P51610 ZRANB3-211ENST00000619650 2494 ntTSL 5 BASIC4.76□□□□□ -1.65
HCFC1P51610 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
HCFC1P51610 LINC02421-201ENST00000542219 3135 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC4.76□□□□□ -1.65
HCFC1P51610 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC4.76□□□□□ -1.65
HCFC1P51610 MFSD4BP1-201ENST00000513330 1552 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 SNORA67-201ENST00000384423 137 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 DCN-202ENST00000393155 2133 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 RRM2B-203ENST00000395912 900 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 RNF212B-201ENST00000399905 1071 ntTSL 5 BASIC4.76□□□□□ -1.65
HCFC1P51610 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 ACAP2-IT1-201ENST00000419899 690 ntTSL 3 BASIC4.76□□□□□ -1.65
HCFC1P51610 AC117434.1-201ENST00000419971 836 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.76□□□□□ -1.65
HCFC1P51610 BX276092.6-201ENST00000430476 250 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 TRIM60P13-201ENST00000432350 1283 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 DEFB122-201ENST00000433453 499 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 AL390879.1-201ENST00000439143 386 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC4.76□□□□□ -1.65
HCFC1P51610 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC4.76□□□□□ -1.65
HCFC1P51610 CBX1P2-201ENST00000453841 458 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 BX276092.8-201ENST00000455722 250 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 AK5-208ENST00000478255 556 ntTSL 2 BASIC4.76□□□□□ -1.65
HCFC1P51610 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 AC090114.3-201ENST00000479267 829 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 LINC01030-201ENST00000517505 738 ntTSL 3 BASIC4.76□□□□□ -1.65
HCFC1P51610 AC137627.1-201ENST00000545761 289 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 PCNPP1-201ENST00000552501 511 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC4.76□□□□□ -1.65
HCFC1P51610 AC007448.2-201ENST00000583452 380 ntTSL 3 BASIC4.76□□□□□ -1.65
HCFC1P51610 NANOGP3-201ENST00000605855 286 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 AL138960.1-201ENST00000613838 513 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 AC015712.7-201ENST00000615211 635 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
HCFC1P51610 AL353796.1-201ENST00000561542 3241 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 APOOL-203ENST00000622540 6466 ntTSL 5 BASIC4.76□□□□□ -1.65
HCFC1P51610 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 AC232271.1-201ENST00000602455 2715 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 KYNUP3-201ENST00000574386 1341 ntBASIC4.76□□□□□ -1.65
HCFC1P51610 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
HCFC1P51610 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
HCFC1P51610 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 KSR2-201ENST00000339824 17726 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.75□□□□□ -1.65
HCFC1P51610 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 TRIP11-201ENST00000267622 9996 ntAPPRIS P2 TSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 MIR141-201ENST00000384975 95 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 RN7SKP151-201ENST00000410230 316 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 AC021876.1-201ENST00000425959 359 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 HNRNPA3P4-201ENST00000427514 803 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 RSU1P1-201ENST00000453416 441 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 OSTCP1-201ENST00000455507 450 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 HESX1-202ENST00000473921 757 ntTSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.75□□□□□ -1.65
HCFC1P51610 AC136777.2-201ENST00000522979 358 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 AC087272.1-201ENST00000523624 533 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 AC025423.4-201ENST00000553141 785 ntTSL 3 BASIC4.75□□□□□ -1.65
HCFC1P51610 AC087286.2-201ENST00000558980 660 ntTSL 3 BASIC4.75□□□□□ -1.65
HCFC1P51610 AC067805.1-201ENST00000559344 470 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 AC104785.1-201ENST00000603220 588 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 AC087632.1-216ENST00000625619 487 ntAPPRIS P1 TSL 3 BASIC4.75□□□□□ -1.65
HCFC1P51610 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 MIR7641-1-201ENST00000627518 61 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 MTRNR2L3-201ENST00000543500 1539 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HCFC1P51610 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 CCAR1-217ENST00000543719 3521 ntTSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 OR55B1P-203ENST00000641518 2602 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 MSL3P1-202ENST00000440028 1468 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 MIPEPP2-201ENST00000422560 1819 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 DTNA-207ENST00000444659 6343 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 APOOL-202ENST00000613473 6445 ntAPPRIS ALT1 TSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 USP15-201ENST00000280377 4748 ntAPPRIS ALT1 TSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 AL034549.2-201ENST00000618285 3373 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 OR1E1-201ENST00000322608 1307 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
HCFC1P51610 PLCE1-203ENST00000371385 6500 ntAPPRIS ALT2 TSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
HCFC1P51610 C1orf146-201ENST00000370373 871 ntTSL 5 BASIC4.75□□□□□ -1.65
HCFC1P51610 RNA5SP91-201ENST00000390902 119 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.75□□□□□ -1.65
HCFC1P51610 AC073333.1-201ENST00000418907 648 ntTSL 3 BASIC4.75□□□□□ -1.65
HCFC1P51610 AC093162.1-201ENST00000419682 124 ntBASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 83.5 ms