Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 MYRFL-201ENST00000299350 820 ntTSL 5 BASIC5.27□□□□□ -1.57
RORAP35398 U3.7-201ENST00000363668 216 ntBASIC5.27□□□□□ -1.57
RORAP35398 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 MIR105-2-201ENST00000385083 81 ntBASIC5.27□□□□□ -1.57
RORAP35398 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.27□□□□□ -1.57
RORAP35398 AL356968.2-201ENST00000412769 1257 ntBASIC5.27□□□□□ -1.57
RORAP35398 AC007556.1-201ENST00000432133 307 ntTSL 2 BASIC5.27□□□□□ -1.57
RORAP35398 TMEM183AP1-205ENST00000432739 290 ntBASIC5.27□□□□□ -1.57
RORAP35398 RPL5P25-201ENST00000441148 775 ntBASIC5.27□□□□□ -1.57
RORAP35398 AL606490.1-201ENST00000452266 765 ntBASIC5.27□□□□□ -1.57
RORAP35398 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RORAP35398 RN7SL727P-201ENST00000482164 296 ntBASIC5.27□□□□□ -1.57
RORAP35398 AC024558.1-201ENST00000505008 528 ntBASIC5.27□□□□□ -1.57
RORAP35398 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC5.27□□□□□ -1.57
RORAP35398 AC107391.1-201ENST00000514966 412 ntTSL 2 BASIC5.27□□□□□ -1.57
RORAP35398 RFPL4AP3-201ENST00000515267 345 ntBASIC5.27□□□□□ -1.57
RORAP35398 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 SLC48A1-205ENST00000547002 751 ntTSL 3 BASIC5.27□□□□□ -1.57
RORAP35398 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.27□□□□□ -1.57
RORAP35398 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC5.27□□□□□ -1.57
RORAP35398 MIR4443-201ENST00000585052 53 ntBASIC5.27□□□□□ -1.57
RORAP35398 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC5.27□□□□□ -1.57
RORAP35398 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
RORAP35398 AL512329.2-201ENST00000607350 548 ntBASIC5.27□□□□□ -1.57
RORAP35398 Metazoa_SRP.207-201ENST00000612254 285 ntBASIC5.27□□□□□ -1.57
RORAP35398 AC074140.1-201ENST00000621617 208 ntBASIC5.27□□□□□ -1.57
RORAP35398 AC136428.4-201ENST00000634254 1155 ntBASIC5.27□□□□□ -1.57
RORAP35398 GABRG2-203ENST00000414552 3927 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC5.27□□□□□ -1.57
RORAP35398 TTC39DP-201ENST00000416781 1688 ntBASIC5.27□□□□□ -1.57
RORAP35398 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.27□□□□□ -1.57
RORAP35398 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC5.27□□□□□ -1.57
RORAP35398 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 AL360270.2-201ENST00000562952 5985 ntBASIC5.27□□□□□ -1.57
RORAP35398 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.27□□□□□ -1.57
RORAP35398 ALB-214ENST00000509063 1911 ntTSL 5 BASIC5.27□□□□□ -1.57
RORAP35398 PEX26-201ENST00000329627 18445 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RORAP35398 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RORAP35398 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 RNU1-146P-201ENST00000364015 165 ntBASIC5.26□□□□□ -1.57
RORAP35398 RN7SKP6-201ENST00000364795 319 ntBASIC5.26□□□□□ -1.57
RORAP35398 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RORAP35398 MIR551A-201ENST00000385042 96 ntBASIC5.26□□□□□ -1.57
RORAP35398 TRDC-201ENST00000390477 720 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RORAP35398 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.26□□□□□ -1.57
RORAP35398 ATP5LP5-201ENST00000483050 299 ntBASIC5.26□□□□□ -1.57
RORAP35398 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.26□□□□□ -1.57
RORAP35398 AC006499.3-201ENST00000506077 748 ntBASIC5.26□□□□□ -1.57
RORAP35398 AC079226.2-201ENST00000509283 518 ntTSL 2 BASIC5.26□□□□□ -1.57
RORAP35398 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC5.26□□□□□ -1.57
RORAP35398 AC078878.1-201ENST00000539832 958 ntBASIC5.26□□□□□ -1.57
RORAP35398 AC084824.2-201ENST00000548906 345 ntBASIC5.26□□□□□ -1.57
RORAP35398 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 ZNF971P-202ENST00000568619 461 ntTSL 3 BASIC5.26□□□□□ -1.57
RORAP35398 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC5.26□□□□□ -1.57
RORAP35398 TTN-AS1-219ENST00000586707 834 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 AC004862.1-203ENST00000598433 1020 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 AC000068.2-201ENST00000608816 460 ntBASIC5.26□□□□□ -1.57
RORAP35398 PACRG-210ENST00000611387 279 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 Metazoa_SRP.111-201ENST00000614073 259 ntBASIC5.26□□□□□ -1.57
RORAP35398 AC008115.4-201ENST00000619780 775 ntBASIC5.26□□□□□ -1.57
RORAP35398 AC018445.2-201ENST00000622987 260 ntBASIC5.26□□□□□ -1.57
RORAP35398 AC021766.1-201ENST00000624404 741 ntBASIC5.26□□□□□ -1.57
RORAP35398 CCT5-215ENST00000625723 135 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 RUVBL2-214ENST00000640699 153 ntTSL 5 BASIC5.26□□□□□ -1.57
RORAP35398 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
RORAP35398 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RORAP35398 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.26□□□□□ -1.57
RORAP35398 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RORAP35398 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RORAP35398 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RORAP35398 CYP3A7-CYP3A51P-202ENST00000620220 1704 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RORAP35398 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 EXOC1-201ENST00000346134 3357 ntAPPRIS P4 TSL 2 BASIC5.25□□□□□ -1.57
RORAP35398 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 LINC01020-202ENST00000508201 1800 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 AC009962.1-201ENST00000567327 3813 ntBASIC5.25□□□□□ -1.57
RORAP35398 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
RORAP35398 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.25□□□□□ -1.57
RORAP35398 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.25□□□□□ -1.57
RORAP35398 SLFN13-201ENST00000285013 8469 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
RORAP35398 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RORAP35398 TRPC4-202ENST00000355779 2784 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
RORAP35398 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.25□□□□□ -1.57
RORAP35398 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RORAP35398 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
RORAP35398 RNU6ATAC18P-201ENST00000408413 101 ntBASIC5.25□□□□□ -1.57
RORAP35398 RPL35AP24-201ENST00000413846 330 ntBASIC5.25□□□□□ -1.57
RORAP35398 AC007161.1-204ENST00000423039 460 ntBASIC5.25□□□□□ -1.57
RORAP35398 RPL7L1P9-201ENST00000431298 745 ntBASIC5.25□□□□□ -1.57
RORAP35398 NANOGP9-201ENST00000439890 892 ntBASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms