Protein–RNA interactions for Protein: P29965

CD40LG, CD40 ligand, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40LGP29965 MIR205HG-209ENST00000458250 406 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40LGP29965 AC023245.1-201ENST00000468501 517 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 RN7SL447P-201ENST00000494711 245 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40LGP29965 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC4.83□□□□□ -1.64
CD40LGP29965 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40LGP29965 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.83□□□□□ -1.64
CD40LGP29965 GUSBP9-201ENST00000510138 584 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 ZNF519P4-201ENST00000514008 125 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 AC099550.1-201ENST00000515495 871 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40LGP29965 RNU6-943P-201ENST00000516960 98 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 AC018442.3-201ENST00000523025 183 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC4.83□□□□□ -1.64
CD40LGP29965 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 AC007066.2-202ENST00000566531 914 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 MIR4502-201ENST00000580432 81 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 H3F3BP2-201ENST00000583907 357 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 LINC01533-204ENST00000590719 435 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 uc_338.31-201ENST00000615595 186 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 MIR6721-201ENST00000617181 87 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 SERPINB10-204ENST00000619595 1194 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 MIR6839-201ENST00000620425 113 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 MIR6806-201ENST00000622141 64 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 AC073592.6-201ENST00000624271 415 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 AC141930.3-201ENST00000640435 762 ntTSL 5 BASIC4.83□□□□□ -1.64
CD40LGP29965 AL596275.2-207ENST00000641188 675 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 AL596275.2-204ENST00000641628 552 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 AL596275.2-206ENST00000641957 626 ntBASIC4.83□□□□□ -1.64
CD40LGP29965 OR10K1-203ENST00000641432 3775 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
CD40LGP29965 PLCE1-202ENST00000371380 12024 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
CD40LGP29965 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC4.83□□□□□ -1.64
CD40LGP29965 CNTRL-205ENST00000373850 5824 ntTSL 2 BASIC4.83□□□□□ -1.64
CD40LGP29965 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD40LGP29965 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40LGP29965 GNL2P1-201ENST00000451274 2190 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC4.82□□□□□ -1.64
CD40LGP29965 SPOCK3-225ENST00000535728 2007 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
CD40LGP29965 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40LGP29965 AC093225.1-201ENST00000506867 1408 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 EPPIN-202ENST00000354280 1987 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40LGP29965 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40LGP29965 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC4.82□□□□□ -1.64
CD40LGP29965 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
CD40LGP29965 YWHAZP6-201ENST00000399764 738 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AC092111.3-201ENST00000402465 496 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
CD40LGP29965 AL132875.1-201ENST00000403623 949 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AL512622.1-201ENST00000414106 481 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40LGP29965 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40LGP29965 AC013470.3-201ENST00000420252 1194 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40LGP29965 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC4.82□□□□□ -1.64
CD40LGP29965 DEFA9P-201ENST00000433042 285 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 RPL35AP21-201ENST00000437667 333 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AC002553.3-201ENST00000453002 341 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AL358876.1-201ENST00000453364 1075 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AC246785.3-201ENST00000455105 314 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40LGP29965 AC112206.1-201ENST00000468416 477 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AC098847.1-201ENST00000473094 348 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 ARPP21-231ENST00000474696 572 ntTSL 2 BASIC4.82□□□□□ -1.64
CD40LGP29965 AC021006.1-201ENST00000489849 553 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AC092349.1-201ENST00000504903 310 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40LGP29965 AC092332.1-201ENST00000563684 829 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 CD24P2-201ENST00000565486 219 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AC087501.3-201ENST00000576477 513 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40LGP29965 AP005136.2-201ENST00000583253 1049 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 ZNF137P-202ENST00000597158 308 ntTSL 3 BASIC4.82□□□□□ -1.64
CD40LGP29965 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40LGP29965 AC096553.1-201ENST00000605169 829 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AL353600.1-201ENST00000608148 251 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40LGP29965 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40LGP29965 AL356752.1-201ENST00000615844 593 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 MIR8069-1-201ENST00000616627 86 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 RFPL4AP6-201ENST00000616792 846 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 MIR8069-2-201ENST00000621412 86 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 OR52B4-201ENST00000624801 1124 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CD40LGP29965 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC4.82□□□□□ -1.64
CD40LGP29965 TEX9-209ENST00000561221 2297 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40LGP29965 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
CD40LGP29965 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC4.82□□□□□ -1.64
CD40LGP29965 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.82□□□□□ -1.64
CD40LGP29965 AHNAK-202ENST00000378024 18787 ntAPPRIS P3 TSL 2 BASIC4.82□□□□□ -1.64
CD40LGP29965 AC092447.5-201ENST00000429367 2741 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
CD40LGP29965 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CD40LGP29965 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.81□□□□□ -1.64
CD40LGP29965 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40LGP29965 OR4E1-202ENST00000641792 3742 ntAPPRIS P5 BASIC4.81□□□□□ -1.64
CD40LGP29965 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
CD40LGP29965 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40LGP29965 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40LGP29965 WFDC11-201ENST00000324384 614 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
CD40LGP29965 ODF3-202ENST00000342593 386 ntTSL 5 BASIC4.81□□□□□ -1.64
CD40LGP29965 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.81□□□□□ -1.64
CD40LGP29965 SNORA68.2-201ENST00000391263 128 ntBASIC4.81□□□□□ -1.64
CD40LGP29965 AC099535.1-201ENST00000408928 371 ntBASIC4.81□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 118.9 ms