Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 RN7SKP124-201ENST00000364730 341 ntBASIC4.98□□□□□ -1.61
SHC1P29353 RN7SKP269-201ENST00000365545 319 ntBASIC4.98□□□□□ -1.61
SHC1P29353 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 ZSCAN12P1-201ENST00000406489 419 ntBASIC4.98□□□□□ -1.61
SHC1P29353 RN7SKP293-201ENST00000411389 296 ntBASIC4.98□□□□□ -1.61
SHC1P29353 USP9YP19-201ENST00000412165 485 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC4.98□□□□□ -1.61
SHC1P29353 FAM204CP-201ENST00000424489 642 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AC097523.2-201ENST00000435551 652 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC4.98□□□□□ -1.61
SHC1P29353 RPL5P16-201ENST00000471467 790 ntBASIC4.98□□□□□ -1.61
SHC1P29353 LINC02040-201ENST00000481004 556 ntTSL 5 BASIC4.98□□□□□ -1.61
SHC1P29353 OR52A4P-202ENST00000481634 799 ntBASIC4.98□□□□□ -1.61
SHC1P29353 ATP5LP5-201ENST00000483050 299 ntBASIC4.98□□□□□ -1.61
SHC1P29353 RN7SL466P-201ENST00000497546 295 ntBASIC4.98□□□□□ -1.61
SHC1P29353 RPS26P24-201ENST00000497656 331 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC4.98□□□□□ -1.61
SHC1P29353 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC4.98□□□□□ -1.61
SHC1P29353 AC021193.1-201ENST00000511607 420 ntBASIC4.98□□□□□ -1.61
SHC1P29353 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.98□□□□□ -1.61
SHC1P29353 AP005403.1-201ENST00000579720 229 ntBASIC4.98□□□□□ -1.61
SHC1P29353 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.98□□□□□ -1.61
SHC1P29353 AL589674.2-201ENST00000604304 337 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AC005014.3-201ENST00000605985 190 ntBASIC4.98□□□□□ -1.61
SHC1P29353 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC4.98□□□□□ -1.61
SHC1P29353 AL353684.1-201ENST00000622677 1120 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AC132068.1-201ENST00000623805 459 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AL691477.1-201ENST00000624398 162 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC4.98□□□□□ -1.61
SHC1P29353 FRG1EP-201ENST00000634469 770 ntBASIC4.98□□□□□ -1.61
SHC1P29353 HSFY1P1-202ENST00000425038 1381 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 AC079097.1-201ENST00000512187 1399 ntBASIC4.98□□□□□ -1.61
SHC1P29353 TCP11X1-202ENST00000622971 1372 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AC003985.2-201ENST00000562268 1669 ntBASIC4.98□□□□□ -1.61
SHC1P29353 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC4.98□□□□□ -1.61
SHC1P29353 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
SHC1P29353 RSF1-204ENST00000480887 5318 ntAPPRIS ALT2 TSL 1 (best) BASIC4.98□□□□□ -1.61
SHC1P29353 TAF9-205ENST00000506736 1331 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHC1P29353 CLIP1-AS1-201ENST00000535976 1745 ntTSL 3 BASIC4.97□□□□□ -1.61
SHC1P29353 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC4.97□□□□□ -1.61
SHC1P29353 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHC1P29353 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
SHC1P29353 CDY11P-201ENST00000447168 1651 ntBASIC4.97□□□□□ -1.61
SHC1P29353 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC4.97□□□□□ -1.61
SHC1P29353 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHC1P29353 MIR323A-201ENST00000362199 86 ntBASIC4.97□□□□□ -1.61
SHC1P29353 U3.25-201ENST00000391209 220 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.97□□□□□ -1.61
SHC1P29353 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC4.97□□□□□ -1.61
SHC1P29353 MTND2P11-201ENST00000423638 648 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC4.97□□□□□ -1.61
SHC1P29353 AC016395.1-201ENST00000444086 465 ntTSL 3 BASIC4.97□□□□□ -1.61
SHC1P29353 AZGP1P2-201ENST00000454506 345 ntBASIC4.97□□□□□ -1.61
SHC1P29353 TAAR4P-201ENST00000454843 1039 ntBASIC4.97□□□□□ -1.61
SHC1P29353 MTND3P6-201ENST00000485242 339 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AC007370.1-201ENST00000503163 316 ntTSL 2 BASIC4.97□□□□□ -1.61
SHC1P29353 SEMA6A-AS1-202ENST00000508424 862 ntTSL 3 BASIC4.97□□□□□ -1.61
SHC1P29353 NPM1P21-201ENST00000513394 762 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AP002981.1-201ENST00000517692 975 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC4.97□□□□□ -1.61
SHC1P29353 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHC1P29353 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.97□□□□□ -1.61
SHC1P29353 MIR7853-201ENST00000584820 132 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.97□□□□□ -1.61
SHC1P29353 AC011445.2-201ENST00000599274 173 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC4.97□□□□□ -1.61
SHC1P29353 AP000769.2-201ENST00000602344 396 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AL023583.1-201ENST00000607518 1143 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AC007620.3-201ENST00000608131 497 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.97□□□□□ -1.61
SHC1P29353 AL162574.2-201ENST00000614618 657 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.97□□□□□ -1.61
SHC1P29353 AC026367.3-201ENST00000619032 590 ntBASIC4.97□□□□□ -1.61
SHC1P29353 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC4.97□□□□□ -1.61
SHC1P29353 AC138965.3-201ENST00000623875 498 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AL118508.4-201ENST00000624142 1176 ntBASIC4.97□□□□□ -1.61
SHC1P29353 AP000720.1-201ENST00000625091 483 ntBASIC4.97□□□□□ -1.61
SHC1P29353 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC4.97□□□□□ -1.61
SHC1P29353 OR51Q1-202ENST00000641085 1096 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHC1P29353 OR8S1-202ENST00000641651 939 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
SHC1P29353 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHC1P29353 LARS-201ENST00000274562 2213 ntTSL 2 BASIC4.97□□□□□ -1.61
SHC1P29353 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.97□□□□□ -1.61
SHC1P29353 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHC1P29353 ICE2P1-201ENST00000512800 1849 ntBASIC4.97□□□□□ -1.61
SHC1P29353 ALB-209ENST00000503124 1741 ntTSL 5 BASIC4.97□□□□□ -1.61
SHC1P29353 AMY1C-201ENST00000370079 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
SHC1P29353 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC4.97□□□□□ -1.61
SHC1P29353 PHACTR2P1-201ENST00000605639 1414 ntBASIC4.97□□□□□ -1.61
SHC1P29353 ATP5A1P1-201ENST00000454088 1321 ntBASIC4.97□□□□□ -1.61
SHC1P29353 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
SHC1P29353 MAPK6PS2-201ENST00000379571 2060 ntBASIC4.96□□□□□ -1.61
SHC1P29353 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SHC1P29353 AC103740.1-201ENST00000558888 7427 ntTSL 2 BASIC4.96□□□□□ -1.61
SHC1P29353 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
SHC1P29353 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 75.9 ms