Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 RPL23AP17-201ENST00000401064 499 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC5.46□□□□□ -1.54
ABCD3P28288 RPS26P38-201ENST00000414476 348 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.46□□□□□ -1.54
ABCD3P28288 HAO2-IT1-201ENST00000419144 311 ntTSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 AL513188.1-201ENST00000421167 614 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCD3P28288 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCD3P28288 PNRC2P1-201ENST00000423940 420 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AC003659.1-201ENST00000424251 465 ntTSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCD3P28288 MTCO2P1-201ENST00000424648 477 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCD3P28288 AL162408.1-201ENST00000428853 433 ntTSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.46□□□□□ -1.54
ABCD3P28288 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 NDUFS5P5-201ENST00000437256 321 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AL583854.1-201ENST00000438818 613 ntTSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 AL663074.2-201ENST00000440621 479 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 EIF5AP4-201ENST00000441206 465 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 PCNPP2-201ENST00000441651 455 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 LARS2-AS1-201ENST00000442534 575 ntTSL 4 BASIC5.46□□□□□ -1.54
ABCD3P28288 LINC01035-201ENST00000445072 784 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCD3P28288 AC092685.1-201ENST00000447960 1243 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 CYCSP42-201ENST00000450823 238 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 BBIP1-208ENST00000454061 812 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 ACA64.1-201ENST00000459171 127 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 NDUFA5P5-201ENST00000468361 342 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AL122020.1-201ENST00000472287 459 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 PFN1P6-201ENST00000476786 399 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AC090058.1-201ENST00000498788 435 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCD3P28288 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 AP000424.2-201ENST00000523784 233 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCD3P28288 CASP5-209ENST00000531367 879 ntTSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 AC244502.2-201ENST00000543361 851 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 RNASE9-205ENST00000553706 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 AL121790.1-201ENST00000554829 738 ntTSL 3 BASIC5.46□□□□□ -1.54
ABCD3P28288 TXNP4-201ENST00000575018 310 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC5.46□□□□□ -1.54
ABCD3P28288 AL359513.1-201ENST00000614364 557 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AL445670.1-201ENST00000618889 801 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AC007683.2-201ENST00000624681 714 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 KLRC4-KLRK1-201ENST00000539300 1507 ntAPPRIS P5 TSL 2 BASIC5.46□□□□□ -1.54
ABCD3P28288 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 GABPB1-204ENST00000396464 1401 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC5.46□□□□□ -1.54
ABCD3P28288 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC5.46□□□□□ -1.54
ABCD3P28288 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 WDR72-203ENST00000557913 5900 ntAPPRIS ALT1 TSL 5 BASIC5.46□□□□□ -1.54
ABCD3P28288 MOB1B-201ENST00000309395 6963 ntAPPRIS P1 TSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 AL355834.1-201ENST00000556602 3965 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 AC092451.3-201ENST00000625067 1343 ntBASIC5.46□□□□□ -1.54
ABCD3P28288 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.46□□□□□ -1.54
ABCD3P28288 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC5.46□□□□□ -1.54
ABCD3P28288 ZNF300P1-202ENST00000520773 3115 ntTSL 5 BASIC5.45□□□□□ -1.54
ABCD3P28288 KIAA0391-209ENST00000604948 1706 ntAPPRIS ALT2 TSL 2 BASIC5.45□□□□□ -1.54
ABCD3P28288 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.45□□□□□ -1.54
ABCD3P28288 RIC3-202ENST00000335425 5223 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
ABCD3P28288 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.45□□□□□ -1.54
ABCD3P28288 ZNF268-205ENST00000536435 13475 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 RNU6-249P-201ENST00000363016 102 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 TRBV23-1-201ENST00000390396 347 ntAPPRIS P1 BASIC5.45□□□□□ -1.54
ABCD3P28288 RNU6-796P-201ENST00000391086 107 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 AL035405.1-201ENST00000400795 710 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC5.45□□□□□ -1.54
ABCD3P28288 FO393401.1-203ENST00000416260 486 ntTSL 5 BASIC5.45□□□□□ -1.54
ABCD3P28288 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC5.45□□□□□ -1.54
ABCD3P28288 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC5.45□□□□□ -1.54
ABCD3P28288 AC002069.1-201ENST00000429649 1159 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.45□□□□□ -1.54
ABCD3P28288 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC5.45□□□□□ -1.54
ABCD3P28288 AL365220.1-201ENST00000432923 399 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 MTCO1P52-201ENST00000433928 531 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 C1orf140-201ENST00000434398 645 ntTSL 3 BASIC5.45□□□□□ -1.54
ABCD3P28288 TRAPPC13P1-201ENST00000435991 1062 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 AL390879.1-201ENST00000439143 386 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC5.45□□□□□ -1.54
ABCD3P28288 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC5.45□□□□□ -1.54
ABCD3P28288 HLA-DPA3-207ENST00000454398 229 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 RNU7-27P-201ENST00000459281 62 ntBASIC5.45□□□□□ -1.54
ABCD3P28288 snoU13.29-201ENST00000459370 104 ntBASIC5.45□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 301.3 ms