Protein–RNA interactions for Protein: P16333

NCK1, Cytoplasmic protein NCK1, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1P16333 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.03□□□□□ -1.6
NCK1P16333 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.03□□□□□ -1.6
NCK1P16333 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC5.03□□□□□ -1.6
NCK1P16333 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.03□□□□□ -1.6
NCK1P16333 LINC01589-201ENST00000422971 548 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NCK1P16333 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC5.03□□□□□ -1.6
NCK1P16333 AC124944.2-201ENST00000429866 1242 ntBASIC5.03□□□□□ -1.6
NCK1P16333 ARAFP2-201ENST00000440565 559 ntBASIC5.03□□□□□ -1.6
NCK1P16333 AC012512.1-201ENST00000446594 718 ntBASIC5.03□□□□□ -1.6
NCK1P16333 AL035090.1-201ENST00000454835 332 ntBASIC5.03□□□□□ -1.6
NCK1P16333 CEACAMP11-201ENST00000455211 583 ntBASIC5.03□□□□□ -1.6
NCK1P16333 RPL7P41-201ENST00000485823 957 ntBASIC5.03□□□□□ -1.6
NCK1P16333 AC008957.1-203ENST00000508745 589 ntTSL 3 BASIC5.03□□□□□ -1.6
NCK1P16333 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC5.03□□□□□ -1.6
NCK1P16333 TBCA-207ENST00000520039 157 ntTSL 3 BASIC5.03□□□□□ -1.6
NCK1P16333 HGNC:24955-208ENST00000521585 1260 ntTSL 4 BASIC5.03□□□□□ -1.6
NCK1P16333 AP003472.2-201ENST00000523554 639 ntTSL 3 BASIC5.03□□□□□ -1.6
NCK1P16333 AC079089.1-202ENST00000528800 1256 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NCK1P16333 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC5.03□□□□□ -1.6
NCK1P16333 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.03□□□□□ -1.6
NCK1P16333 AC093591.2-201ENST00000565254 3843 ntBASIC5.03□□□□□ -1.6
NCK1P16333 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC5.03□□□□□ -1.6
NCK1P16333 AC010487.1-201ENST00000594408 1172 ntBASIC5.03□□□□□ -1.6
NCK1P16333 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC5.03□□□□□ -1.6
NCK1P16333 GMFG-212ENST00000602185 423 ntTSL 3 BASIC5.03□□□□□ -1.6
NCK1P16333 SNORA35B-201ENST00000607417 129 ntBASIC5.03□□□□□ -1.6
NCK1P16333 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC5.03□□□□□ -1.6
NCK1P16333 REV3L-214ENST00000619481 969 ntTSL 5 BASIC5.03□□□□□ -1.6
NCK1P16333 AC068631.1-223ENST00000625877 472 ntTSL 5 BASIC5.03□□□□□ -1.6
NCK1P16333 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC5.03□□□□□ -1.6
NCK1P16333 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NCK1P16333 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NCK1P16333 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.03□□□□□ -1.6
NCK1P16333 AC063976.2-201ENST00000425667 3556 ntBASIC5.03□□□□□ -1.6
NCK1P16333 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 AC010266.2-201ENST00000564741 3255 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 NBPF10-201ENST00000583866 13042 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NCK1P16333 RN7SKP171-201ENST00000364417 303 ntBASIC5.02□□□□□ -1.61
NCK1P16333 RN7SKP6-201ENST00000364795 319 ntBASIC5.02□□□□□ -1.61
NCK1P16333 HMGB1P20-201ENST00000402555 677 ntBASIC5.02□□□□□ -1.61
NCK1P16333 RPS3AP2-201ENST00000407190 754 ntBASIC5.02□□□□□ -1.61
NCK1P16333 SNORA79B-201ENST00000410557 148 ntBASIC5.02□□□□□ -1.61
NCK1P16333 PCNPP4-201ENST00000414817 517 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.02□□□□□ -1.61
NCK1P16333 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC5.02□□□□□ -1.61
NCK1P16333 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.02□□□□□ -1.61
NCK1P16333 AL512637.1-201ENST00000439523 1231 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AL034380.1-201ENST00000448791 306 ntTSL 3 BASIC5.02□□□□□ -1.61
NCK1P16333 AC104339.1-201ENST00000465478 348 ntBASIC5.02□□□□□ -1.61
NCK1P16333 RN7SL814P-201ENST00000487715 300 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AC112206.2-204ENST00000504068 793 ntTSL 3 BASIC5.02□□□□□ -1.61
NCK1P16333 MTND6P2-201ENST00000512226 524 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AC009623.1-201ENST00000517964 1131 ntTSL 2 BASIC5.02□□□□□ -1.61
NCK1P16333 AC020937.1-201ENST00000519677 1013 ntBASIC5.02□□□□□ -1.61
NCK1P16333 TPT1-AS1-209ENST00000520585 818 ntTSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 AP006245.2-201ENST00000522004 300 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.02□□□□□ -1.61
NCK1P16333 AC027369.2-201ENST00000528030 440 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AP000648.1-201ENST00000529682 397 ntBASIC5.02□□□□□ -1.61
NCK1P16333 LINC02446-201ENST00000544591 868 ntTSL 2 BASIC5.02□□□□□ -1.61
NCK1P16333 AC006349.1-201ENST00000555526 235 ntBASIC5.02□□□□□ -1.61
NCK1P16333 MRPS21P7-201ENST00000566937 238 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AC011626.1-201ENST00000604710 562 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AL031601.1-201ENST00000605702 394 ntBASIC5.02□□□□□ -1.61
NCK1P16333 AL451049.1-201ENST00000608672 497 ntBASIC5.02□□□□□ -1.61
NCK1P16333 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.02□□□□□ -1.61
NCK1P16333 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
NCK1P16333 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.02□□□□□ -1.61
NCK1P16333 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 OPRM1-215ENST00000520708 1519 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC5.02□□□□□ -1.61
NCK1P16333 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NCK1P16333 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC5.01□□□□□ -1.61
NCK1P16333 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NCK1P16333 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC5.01□□□□□ -1.61
NCK1P16333 C3orf67-AS1-202ENST00000482372 2203 ntTSL 2 BASIC5.01□□□□□ -1.61
NCK1P16333 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.01□□□□□ -1.61
NCK1P16333 PATL1-201ENST00000300146 4072 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NCK1P16333 ZC3H14-205ENST00000393514 2195 ntTSL 5 BASIC5.01□□□□□ -1.61
NCK1P16333 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.01□□□□□ -1.61
NCK1P16333 PRPF4B-201ENST00000337659 4415 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NCK1P16333 AC114786.1-201ENST00000512892 1415 ntBASIC5.01□□□□□ -1.61
NCK1P16333 SYT14P1-202ENST00000600441 1448 ntBASIC5.01□□□□□ -1.61
NCK1P16333 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
NCK1P16333 CLEC2D-201ENST00000261339 465 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NCK1P16333 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NCK1P16333 OR5P2-201ENST00000329434 1069 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms