Protein–RNA interactions for Protein: P10747

CD28, T-cell-specific surface glycoprotein CD28, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD28P10747 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD28P10747 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC4.27□□□□□ -1.73
CD28P10747 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CD28P10747 OR2J1-202ENST00000641659 2144 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
CD28P10747 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
CD28P10747 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC4.27□□□□□ -1.73
CD28P10747 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CD28P10747 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
CD28P10747 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.26□□□□□ -1.73
CD28P10747 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC4.26□□□□□ -1.73
CD28P10747 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 MIA3-203ENST00000344922 8142 ntAPPRIS P2 TSL 5 BASIC4.26□□□□□ -1.73
CD28P10747 AL132656.2-201ENST00000482985 1837 ntTSL 5 BASIC4.26□□□□□ -1.73
CD28P10747 GUCY1A3-201ENST00000296518 4400 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 HIST1H1A-201ENST00000244573 648 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CD28P10747 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 U8.4-201ENST00000363626 134 ntBASIC4.26□□□□□ -1.73
CD28P10747 RNU1-43P-201ENST00000365052 165 ntBASIC4.26□□□□□ -1.73
CD28P10747 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CD28P10747 SNORA67-201ENST00000384423 137 ntBASIC4.26□□□□□ -1.73
CD28P10747 NACAP7-201ENST00000407371 609 ntBASIC4.26□□□□□ -1.73
CD28P10747 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC4.26□□□□□ -1.73
CD28P10747 TMEM196-203ENST00000422233 775 ntTSL 5 BASIC4.26□□□□□ -1.73
CD28P10747 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.26□□□□□ -1.73
CD28P10747 SRSF1P1-201ENST00000424058 520 ntBASIC4.26□□□□□ -1.73
CD28P10747 AC108075.1-201ENST00000424692 529 ntBASIC4.26□□□□□ -1.73
CD28P10747 MRPS21P2-201ENST00000424704 264 ntBASIC4.26□□□□□ -1.73
CD28P10747 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC4.26□□□□□ -1.73
CD28P10747 GSTM5P1-201ENST00000434751 660 ntBASIC4.26□□□□□ -1.73
CD28P10747 NANOGP9-201ENST00000439890 892 ntBASIC4.26□□□□□ -1.73
CD28P10747 SERPINA7P1-201ENST00000443077 631 ntBASIC4.26□□□□□ -1.73
CD28P10747 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CD28P10747 AL035090.1-201ENST00000454835 332 ntBASIC4.26□□□□□ -1.73
CD28P10747 RN7SL329P-201ENST00000467740 299 ntBASIC4.26□□□□□ -1.73
CD28P10747 RPL7AP6-201ENST00000477943 801 ntBASIC4.26□□□□□ -1.73
CD28P10747 LINC02508-201ENST00000504165 426 ntTSL 3 BASIC4.26□□□□□ -1.73
CD28P10747 AC026782.2-201ENST00000510845 636 ntBASIC4.26□□□□□ -1.73
CD28P10747 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.26□□□□□ -1.73
CD28P10747 MTND6P2-201ENST00000512226 524 ntBASIC4.26□□□□□ -1.73
CD28P10747 LINC00992-202ENST00000514186 564 ntTSL 5 BASIC4.26□□□□□ -1.73
CD28P10747 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC4.26□□□□□ -1.73
CD28P10747 AC137627.1-201ENST00000545761 289 ntBASIC4.26□□□□□ -1.73
CD28P10747 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC4.26□□□□□ -1.73
CD28P10747 OR11J2P-201ENST00000555298 907 ntBASIC4.26□□□□□ -1.73
CD28P10747 DISC1FP1-203ENST00000562678 796 ntTSL 3 BASIC4.26□□□□□ -1.73
CD28P10747 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC4.26□□□□□ -1.73
CD28P10747 AC109460.2-201ENST00000569974 544 ntTSL 3 BASIC4.26□□□□□ -1.73
CD28P10747 AC090286.3-201ENST00000573133 187 ntBASIC4.26□□□□□ -1.73
CD28P10747 AC060766.1-201ENST00000590824 627 ntBASIC4.26□□□□□ -1.73
CD28P10747 AC016747.2-201ENST00000605902 364 ntTSL 2 BASIC4.26□□□□□ -1.73
CD28P10747 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.26□□□□□ -1.73
CD28P10747 AL139407.1-201ENST00000613826 1175 ntBASIC4.26□□□□□ -1.73
CD28P10747 WBP1LP8-201ENST00000617401 327 ntBASIC4.26□□□□□ -1.73
CD28P10747 LAMTOR5-AS1-233ENST00000625451 470 ntTSL 5 BASIC4.26□□□□□ -1.73
CD28P10747 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.26□□□□□ -1.73
CD28P10747 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC4.26□□□□□ -1.73
CD28P10747 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
CD28P10747 AC092070.2-203ENST00000598377 3644 ntBASIC4.26□□□□□ -1.73
CD28P10747 AL161911.1-202ENST00000464488 1534 ntAPPRIS P1 TSL 5 BASIC4.26□□□□□ -1.73
CD28P10747 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC4.26□□□□□ -1.73
CD28P10747 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 AC092451.3-201ENST00000625067 1343 ntBASIC4.25□□□□□ -1.73
CD28P10747 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 NLRP3P1-201ENST00000622303 1785 ntBASIC4.25□□□□□ -1.73
CD28P10747 CDKAL1-201ENST00000274695 3272 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 MYBPC1-216ENST00000550270 3426 ntAPPRIS ALT2 TSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC4.25□□□□□ -1.73
CD28P10747 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 AL353751.1-201ENST00000354541 495 ntTSL 3 BASIC4.25□□□□□ -1.73
CD28P10747 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC4.25□□□□□ -1.73
CD28P10747 U3.2-201ENST00000362981 210 ntBASIC4.25□□□□□ -1.73
CD28P10747 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC4.25□□□□□ -1.73
CD28P10747 MIR765-201ENST00000390226 114 ntBASIC4.25□□□□□ -1.73
CD28P10747 RNU1-149P-201ENST00000390870 161 ntBASIC4.25□□□□□ -1.73
CD28P10747 NPM1P37-201ENST00000403105 874 ntBASIC4.25□□□□□ -1.73
CD28P10747 RNU6ATAC21P-201ENST00000408656 126 ntBASIC4.25□□□□□ -1.73
CD28P10747 RPSAP35-201ENST00000413753 818 ntBASIC4.25□□□□□ -1.73
CD28P10747 RNGTTP1-201ENST00000420965 728 ntBASIC4.25□□□□□ -1.73
CD28P10747 PRUNEP1-201ENST00000425846 705 ntBASIC4.25□□□□□ -1.73
CD28P10747 AC005033.1-201ENST00000428904 813 ntBASIC4.25□□□□□ -1.73
CD28P10747 ATP13A4-AS1-202ENST00000431512 394 ntTSL 3 BASIC4.25□□□□□ -1.73
CD28P10747 AC073062.1-201ENST00000434509 455 ntTSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 RPL12P3-201ENST00000440080 396 ntBASIC4.25□□□□□ -1.73
CD28P10747 LINC01359-203ENST00000444349 381 ntTSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 AC073072.2-201ENST00000447425 348 ntBASIC4.25□□□□□ -1.73
CD28P10747 OTX2P1-201ENST00000450956 354 ntBASIC4.25□□□□□ -1.73
CD28P10747 COX6B1P2-201ENST00000489624 230 ntBASIC4.25□□□□□ -1.73
CD28P10747 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC4.25□□□□□ -1.73
CD28P10747 AC002456.2-201ENST00000509356 380 ntBASIC4.25□□□□□ -1.73
CD28P10747 AC111000.6-201ENST00000514471 709 ntBASIC4.25□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms