Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.28□□□□□ -1.56
HOXC4P09017 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC4P09017 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.28□□□□□ -1.56
HOXC4P09017 MIR7155-201ENST00000615925 56 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 AC241377.1-201ENST00000619797 406 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 AP003400.3-201ENST00000624904 346 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 AC000095.2-202ENST00000637415 154 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 AL078595.2-201ENST00000605309 1780 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 AL132656.3-201ENST00000606384 1595 ntBASIC5.28□□□□□ -1.56
HOXC4P09017 SRPK2-201ENST00000357311 3700 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 PNLIPRP3-201ENST00000369230 2354 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
HOXC4P09017 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.28□□□□□ -1.56
HOXC4P09017 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
HOXC4P09017 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
HOXC4P09017 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC5.28□□□□□ -1.56
HOXC4P09017 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
HOXC4P09017 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC4P09017 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXC4P09017 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXC4P09017 BCORP1-203ENST00000513194 5093 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC4P09017 PRR14L-201ENST00000327423 10826 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
HOXC4P09017 AP002512.4-202ENST00000641599 4530 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXC4P09017 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 ACSL5-202ENST00000354655 3351 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXC4P09017 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
HOXC4P09017 PAGE2B-202ENST00000374974 456 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC4P09017 OR2J2-202ENST00000377167 1272 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXC4P09017 SON-204ENST00000381692 2463 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 SNORA70-201ENST00000384436 135 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 MIR765-201ENST00000390226 114 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 HSPA8P15-201ENST00000401676 786 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 DUTP5-201ENST00000406790 469 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
HOXC4P09017 HNRNPA3P4-201ENST00000427514 803 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 Z92846.1-201ENST00000456203 268 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 AC004815.1-201ENST00000484185 331 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 RPL15P21-201ENST00000495592 567 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 GABRA2-205ENST00000507069 1562 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXC4P09017 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC4P09017 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXC4P09017 AC008575.1-201ENST00000520401 694 ntAPPRIS P1 TSL 3 BASIC5.27□□□□□ -1.57
HOXC4P09017 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC5.27□□□□□ -1.57
HOXC4P09017 OR4A46P-201ENST00000527255 933 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 AC079064.1-201ENST00000528365 362 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 CA1-224ENST00000542576 1236 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
HOXC4P09017 HMGN2P6-201ENST00000551091 273 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXC4P09017 MIR4443-201ENST00000585052 53 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 AC011447.4-201ENST00000587562 111 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 AP000769.2-201ENST00000602344 396 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 OR51C1P-201ENST00000608504 942 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 ANKS1B-216ENST00000549558 2268 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 HSPA8P14-201ENST00000552265 1805 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 AC100757.1-201ENST00000616872 1835 ntBASIC5.27□□□□□ -1.57
HOXC4P09017 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.27□□□□□ -1.57
HOXC4P09017 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 HDAC9-203ENST00000406072 4102 ntTSL 5 BASIC5.27□□□□□ -1.57
HOXC4P09017 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.27□□□□□ -1.57
HOXC4P09017 FGL1-209ENST00000522444 1367 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 TCF7L2-217ENST00000536810 3953 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
HOXC4P09017 AC048341.2-201ENST00000550290 8693 ntTSL 4 BASIC5.27□□□□□ -1.57
HOXC4P09017 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC4P09017 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 CR383656.5-201ENST00000547616 1340 ntBASIC5.26□□□□□ -1.57
HOXC4P09017 RMST-209ENST00000639542 3269 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXC4P09017 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 ARHGEF3-203ENST00000413728 3992 ntTSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 SPINK14-201ENST00000356972 294 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 U8.4-201ENST00000363626 134 ntBASIC5.26□□□□□ -1.57
HOXC4P09017 RNU1-146P-201ENST00000364015 165 ntBASIC5.26□□□□□ -1.57
HOXC4P09017 RNU1-43P-201ENST00000365052 165 ntBASIC5.26□□□□□ -1.57
HOXC4P09017 CABYR-204ENST00000399499 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
HOXC4P09017 PPIAP9-201ENST00000403866 498 ntBASIC5.26□□□□□ -1.57
HOXC4P09017 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.26□□□□□ -1.57
HOXC4P09017 LINC01781-202ENST00000443104 591 ntTSL 2 BASIC5.26□□□□□ -1.57
HOXC4P09017 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC5.26□□□□□ -1.57
HOXC4P09017 DNAJB5P1-201ENST00000454004 806 ntBASIC5.26□□□□□ -1.57
HOXC4P09017 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC5.26□□□□□ -1.57
HOXC4P09017 RN7SL515P-201ENST00000463999 297 ntBASIC5.26□□□□□ -1.57
HOXC4P09017 AP000797.2-201ENST00000475768 606 ntBASIC5.26□□□□□ -1.57
HOXC4P09017 AC058823.1-201ENST00000485315 474 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms