Protein–RNA interactions for Protein: P04233

CD74, HLA class II histocompatibility antigen gamma chain, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD74P04233 AC090888.3-201ENST00000558917 509 ntBASIC4.55□□□□□ -1.68
CD74P04233 AC087190.2-201ENST00000565648 731 ntTSL 3 BASIC4.55□□□□□ -1.68
CD74P04233 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.55□□□□□ -1.68
CD74P04233 AP001052.1-201ENST00000626421 99 ntBASIC4.55□□□□□ -1.68
CD74P04233 SMG1P4-204ENST00000523028 4131 ntBASIC4.55□□□□□ -1.68
CD74P04233 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 RANBP3L-201ENST00000296604 3104 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC4.55□□□□□ -1.68
CD74P04233 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC4.55□□□□□ -1.68
CD74P04233 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.55□□□□□ -1.68
CD74P04233 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.55□□□□□ -1.68
CD74P04233 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC4.55□□□□□ -1.68
CD74P04233 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 PGM3-211ENST00000512866 2013 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CD74P04233 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC4.55□□□□□ -1.68
CD74P04233 IFIT1P1-201ENST00000400497 1449 ntBASIC4.55□□□□□ -1.68
CD74P04233 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 AL355306.2-206ENST00000635233 1903 ntTSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.54□□□□□ -1.68
CD74P04233 OR6C3-202ENST00000641364 1341 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CD74P04233 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 GYS2-201ENST00000261195 3132 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 SKP1-202ENST00000353411 9474 ntAPPRIS P4 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 RN7SKP153-201ENST00000365026 316 ntBASIC4.54□□□□□ -1.68
CD74P04233 FETUB-203ENST00000382136 1040 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 RNU6-729P-201ENST00000384399 107 ntBASIC4.54□□□□□ -1.68
CD74P04233 AC005522.1-201ENST00000395416 346 ntBASIC4.54□□□□□ -1.68
CD74P04233 RBBP4P5-201ENST00000398583 1266 ntBASIC4.54□□□□□ -1.68
CD74P04233 YWHAZP6-201ENST00000399764 738 ntBASIC4.54□□□□□ -1.68
CD74P04233 SNORA11.3-201ENST00000408471 128 ntBASIC4.54□□□□□ -1.68
CD74P04233 MIR1271-201ENST00000408537 86 ntBASIC4.54□□□□□ -1.68
CD74P04233 EEF1A1P29-201ENST00000416082 1096 ntBASIC4.54□□□□□ -1.68
CD74P04233 OR6C64P-201ENST00000419708 825 ntBASIC4.54□□□□□ -1.68
CD74P04233 AL022331.1-201ENST00000429025 477 ntBASIC4.54□□□□□ -1.68
CD74P04233 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC4.54□□□□□ -1.68
CD74P04233 BTF3P6-201ENST00000448054 499 ntBASIC4.54□□□□□ -1.68
CD74P04233 HMGB1P7-201ENST00000450921 612 ntBASIC4.54□□□□□ -1.68
CD74P04233 ST20-201ENST00000478497 1004 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 AC093827.1-201ENST00000480094 861 ntBASIC4.54□□□□□ -1.68
CD74P04233 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.54□□□□□ -1.68
CD74P04233 IGHVII-60-1-201ENST00000519079 256 ntBASIC4.54□□□□□ -1.68
CD74P04233 IGKV3D-25-201ENST00000519599 235 ntBASIC4.54□□□□□ -1.68
CD74P04233 LINC01033-204ENST00000523194 715 ntTSL 2 BASIC4.54□□□□□ -1.68
CD74P04233 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CD74P04233 SETP1-201ENST00000556014 845 ntBASIC4.54□□□□□ -1.68
CD74P04233 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 USP3-AS1-202ENST00000559357 455 ntTSL 2 BASIC4.54□□□□□ -1.68
CD74P04233 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 AC011840.5-201ENST00000582125 771 ntBASIC4.54□□□□□ -1.68
CD74P04233 RN7SL435P-201ENST00000584418 282 ntBASIC4.54□□□□□ -1.68
CD74P04233 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC4.54□□□□□ -1.68
CD74P04233 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 LINC01355-202ENST00000604481 400 ntTSL 2 BASIC4.54□□□□□ -1.68
CD74P04233 AC104836.2-201ENST00000609675 1293 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 uc_338.31-201ENST00000615595 186 ntBASIC4.54□□□□□ -1.68
CD74P04233 AP005431.1-201ENST00000618479 319 ntBASIC4.54□□□□□ -1.68
CD74P04233 SNORA11.6-201ENST00000619030 128 ntBASIC4.54□□□□□ -1.68
CD74P04233 AC073592.6-201ENST00000624271 415 ntBASIC4.54□□□□□ -1.68
CD74P04233 TMEM30CP-203ENST00000637814 1035 ntBASIC4.54□□□□□ -1.68
CD74P04233 PATE1-201ENST00000305738 1527 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 OSBPL9P1-201ENST00000604744 1469 ntBASIC4.54□□□□□ -1.68
CD74P04233 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CD74P04233 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 AC093225.1-201ENST00000506867 1408 ntBASIC4.54□□□□□ -1.68
CD74P04233 PCDH15-215ENST00000409834 5401 ntTSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CD74P04233 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.54□□□□□ -1.68
CD74P04233 CASC19-255ENST00000641733 1385 ntBASIC4.53□□□□□ -1.68
CD74P04233 AL606537.1-201ENST00000607258 2011 ntBASIC4.53□□□□□ -1.68
CD74P04233 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC4.53□□□□□ -1.68
CD74P04233 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD74P04233 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD74P04233 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC4.53□□□□□ -1.68
CD74P04233 LINC00102-201ENST00000445785 1340 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
CD74P04233 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.53□□□□□ -1.68
CD74P04233 DYDC1-202ENST00000372204 750 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD74P04233 SYCE3-202ENST00000406915 448 ntAPPRIS P1 TSL 2 BASIC4.53□□□□□ -1.68
CD74P04233 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.53□□□□□ -1.68
CD74P04233 AL356476.1-201ENST00000421481 480 ntTSL 5 BASIC4.53□□□□□ -1.68
CD74P04233 BX119321.1-201ENST00000428912 797 ntBASIC4.53□□□□□ -1.68
CD74P04233 KCTD9P1-201ENST00000430462 1167 ntBASIC4.53□□□□□ -1.68
CD74P04233 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.53□□□□□ -1.68
CD74P04233 RPL12P17-201ENST00000432393 498 ntBASIC4.53□□□□□ -1.68
CD74P04233 AL139280.1-201ENST00000436340 463 ntTSL 3 BASIC4.53□□□□□ -1.68
CD74P04233 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.53□□□□□ -1.68
CD74P04233 RBMY2AP-201ENST00000445405 1157 ntBASIC4.53□□□□□ -1.68
CD74P04233 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC4.53□□□□□ -1.68
CD74P04233 RBMY2CP-201ENST00000448575 1157 ntBASIC4.53□□□□□ -1.68
CD74P04233 RBMY2DP-202ENST00000448881 1157 ntBASIC4.53□□□□□ -1.68
CD74P04233 RBMY2BP-202ENST00000451071 1156 ntBASIC4.53□□□□□ -1.68
CD74P04233 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC4.53□□□□□ -1.68
CD74P04233 DNAJB5P1-201ENST00000454004 806 ntBASIC4.53□□□□□ -1.68
CD74P04233 AL035090.1-201ENST00000454835 332 ntBASIC4.53□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 133.6 ms