Protein–RNA interactions for Protein: P02452

COL1A1, Collagen alpha-1(I) chain, humanhuman

Predicted RBP Predictions only

Length 1,464 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1P02452 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 WDPCP-202ENST00000398544 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 NFAT5-202ENST00000354436 13229 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC6.33□□□□□ -1.4
COL1A1P02452 DEFB136-201ENST00000382209 237 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
COL1A1P02452 METTL5-205ENST00000409837 936 ntAPPRIS ALT1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC6.33□□□□□ -1.4
COL1A1P02452 CEACAMP9-201ENST00000442990 513 ntBASIC6.33□□□□□ -1.4
COL1A1P02452 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC6.33□□□□□ -1.4
COL1A1P02452 AC009220.1-201ENST00000451614 275 ntBASIC6.33□□□□□ -1.4
COL1A1P02452 RN7SL346P-201ENST00000491561 294 ntBASIC6.33□□□□□ -1.4
COL1A1P02452 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC6.33□□□□□ -1.4
COL1A1P02452 AC138965.1-202ENST00000502354 547 ntTSL 5 BASIC6.33□□□□□ -1.4
COL1A1P02452 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC6.33□□□□□ -1.4
COL1A1P02452 AC140125.3-201ENST00000505248 547 ntTSL 4 BASIC6.33□□□□□ -1.4
COL1A1P02452 AC091180.4-201ENST00000511322 245 ntTSL 2 BASIC6.33□□□□□ -1.4
COL1A1P02452 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
COL1A1P02452 MIR378J-201ENST00000611988 109 ntBASIC6.33□□□□□ -1.4
COL1A1P02452 EIF3FP1-201ENST00000613970 806 ntBASIC6.33□□□□□ -1.4
COL1A1P02452 MIR6133-201ENST00000617057 108 ntBASIC6.33□□□□□ -1.4
COL1A1P02452 AL731566.2-201ENST00000618971 317 ntBASIC6.33□□□□□ -1.4
COL1A1P02452 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC6.33□□□□□ -1.4
COL1A1P02452 LINC01002-236ENST00000634022 378 ntTSL 5 BASIC6.33□□□□□ -1.4
COL1A1P02452 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
COL1A1P02452 MBNL2-204ENST00000397601 4487 ntTSL 5 BASIC6.33□□□□□ -1.4
COL1A1P02452 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.33□□□□□ -1.4
COL1A1P02452 SETDB2-205ENST00000611815 5313 ntAPPRIS ALT2 TSL 5 BASIC6.33□□□□□ -1.4
COL1A1P02452 DRP2-204ENST00000538510 6852 ntAPPRIS P3 TSL 2 BASIC6.32□□□□□ -1.4
COL1A1P02452 DCHS2-207ENST00000623607 8912 ntAPPRIS P2 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL1A1P02452 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.32□□□□□ -1.4
COL1A1P02452 CACNA1E-209ENST00000621551 14886 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
COL1A1P02452 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL1A1P02452 RN7SKP95-201ENST00000362860 303 ntBASIC6.32□□□□□ -1.4
COL1A1P02452 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL1A1P02452 LINC01945-201ENST00000419784 840 ntTSL 2 BASIC6.32□□□□□ -1.4
COL1A1P02452 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC6.32□□□□□ -1.4
COL1A1P02452 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
COL1A1P02452 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
COL1A1P02452 NDUFA5P8-201ENST00000449019 346 ntBASIC6.32□□□□□ -1.4
COL1A1P02452 RN7SL738P-201ENST00000470264 297 ntBASIC6.32□□□□□ -1.4
COL1A1P02452 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC6.32□□□□□ -1.4
COL1A1P02452 RPL7P41-201ENST00000485823 957 ntBASIC6.32□□□□□ -1.4
COL1A1P02452 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC6.32□□□□□ -1.4
COL1A1P02452 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC6.32□□□□□ -1.4
COL1A1P02452 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC6.32□□□□□ -1.4
COL1A1P02452 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.32□□□□□ -1.4
COL1A1P02452 RPL26-204ENST00000578812 1002 ntTSL 2 BASIC6.32□□□□□ -1.4
COL1A1P02452 MIR4697-201ENST00000582977 78 ntBASIC6.32□□□□□ -1.4
COL1A1P02452 MIR4420-201ENST00000583944 77 ntBASIC6.32□□□□□ -1.4
COL1A1P02452 AL022394.1-201ENST00000606979 292 ntBASIC6.32□□□□□ -1.4
COL1A1P02452 AC005618.4-201ENST00000625053 554 ntBASIC6.32□□□□□ -1.4
COL1A1P02452 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC6.32□□□□□ -1.4
COL1A1P02452 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.32□□□□□ -1.4
COL1A1P02452 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL1A1P02452 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC6.31□□□□□ -1.4
COL1A1P02452 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC6.31□□□□□ -1.4
COL1A1P02452 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL1A1P02452 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL1A1P02452 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC6.31□□□□□ -1.4
COL1A1P02452 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL1A1P02452 RNA5SP90-201ENST00000364801 99 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 TRAV10-201ENST00000390432 379 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
COL1A1P02452 AL158827.1-201ENST00000416300 391 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 KCNMA1-AS3-201ENST00000418515 701 ntTSL 3 BASIC6.31□□□□□ -1.4
COL1A1P02452 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.31□□□□□ -1.4
COL1A1P02452 BX323845.1-201ENST00000432417 179 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL1A1P02452 GSTA7P-201ENST00000438425 448 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 AL161618.1-201ENST00000438738 761 ntTSL 5 BASIC6.31□□□□□ -1.4
COL1A1P02452 AL161621.1-201ENST00000444796 340 ntTSL 3 BASIC6.31□□□□□ -1.4
COL1A1P02452 RPL7P16-201ENST00000479738 738 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC6.31□□□□□ -1.4
COL1A1P02452 LINC00616-203ENST00000512536 568 ntTSL 4 BASIC6.31□□□□□ -1.4
COL1A1P02452 AC006427.1-201ENST00000514359 712 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 AL671862.1-201ENST00000515851 349 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 AC005000.1-201ENST00000536192 288 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC6.31□□□□□ -1.4
COL1A1P02452 AC233699.1-201ENST00000569955 1168 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.31□□□□□ -1.4
COL1A1P02452 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL1A1P02452 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL1A1P02452 NLRP3P1-201ENST00000622303 1785 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 MLH3-201ENST00000355774 7896 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
COL1A1P02452 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC6.31□□□□□ -1.4
COL1A1P02452 AP000547.3-204ENST00000588548 2523 ntBASIC6.31□□□□□ -1.4
COL1A1P02452 MARCH7-201ENST00000259050 5922 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
COL1A1P02452 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
COL1A1P02452 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.3□□□□□ -1.4
COL1A1P02452 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
COL1A1P02452 FRK-201ENST00000606080 13230 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
COL1A1P02452 OR6C4-203ENST00000641851 4989 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 91 ms