Protein–RNA interactions for Protein: O95484

CLDN9, Claudin-9, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN9O95484 RPL23AP19-201ENST00000436229 369 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN9O95484 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN9O95484 RPL36AP39-201ENST00000445859 318 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AC105399.1-202ENST00000447303 205 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AC022133.1-201ENST00000490961 571 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AC093607.1-202ENST00000499715 559 ntTSL 4 BASIC5.2□□□□□ -1.58
CLDN9O95484 IMPA1P1-201ENST00000510718 842 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AC091819.2-201ENST00000522292 490 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN9O95484 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN9O95484 TRDN-205ENST00000546248 1179 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN9O95484 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN9O95484 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.2□□□□□ -1.58
CLDN9O95484 AC234775.3-201ENST00000564612 656 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AC015720.2-201ENST00000567709 334 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AC005341.1-201ENST00000571086 708 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AC010487.1-201ENST00000594408 1172 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AL137246.1-201ENST00000607072 977 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AL356752.1-201ENST00000615844 593 ntBASIC5.2□□□□□ -1.58
CLDN9O95484 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.2□□□□□ -1.58
CLDN9O95484 LINC00240-204ENST00000607607 5607 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN9O95484 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
CLDN9O95484 DLGAP5-202ENST00000395425 2954 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN9O95484 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.2□□□□□ -1.58
CLDN9O95484 ZNF567-203ENST00000585696 3734 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
CLDN9O95484 AL359313.1-201ENST00000447311 2293 ntTSL 2 BASIC5.2□□□□□ -1.58
CLDN9O95484 AC002525.1-201ENST00000624392 1622 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.19□□□□□ -1.58
CLDN9O95484 PLCXD3-201ENST00000328457 7538 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLDN9O95484 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN9O95484 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 LINC01553-203ENST00000521074 4329 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN9O95484 AC005005.4-201ENST00000623789 16698 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 TNRC6B-206ENST00000454349 18279 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 AC007068.1-201ENST00000396690 844 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 AL356968.2-201ENST00000412769 1257 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 MTND6P12-201ENST00000428247 522 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 RPL5P25-201ENST00000441148 775 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 AL161722.1-201ENST00000446972 1032 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN9O95484 OR52E3P-201ENST00000452083 936 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 AL035090.1-201ENST00000454835 332 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN9O95484 SETP20-201ENST00000457046 852 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 AC090602.1-201ENST00000469695 252 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 TRBV8-1-201ENST00000481590 279 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 USP9YP2-201ENST00000504503 1000 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 AC074087.1-201ENST00000512059 724 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 USP9YP1-201ENST00000513521 1002 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 AP006259.1-201ENST00000528520 561 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 AP004607.2-201ENST00000533949 322 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.19□□□□□ -1.58
CLDN9O95484 PCED1B-AS1-210ENST00000552975 378 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 LINC01578-206ENST00000555520 977 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN9O95484 LINC01904-201ENST00000564872 861 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN9O95484 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.19□□□□□ -1.58
CLDN9O95484 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC5.19□□□□□ -1.58
CLDN9O95484 RFC1-217ENST00000639695 867 ntTSL 5 BASIC5.19□□□□□ -1.58
CLDN9O95484 GPR1-201ENST00000407325 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 LINC01538-201ENST00000588074 2408 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 CD47-201ENST00000355354 5020 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.19□□□□□ -1.58
CLDN9O95484 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC5.19□□□□□ -1.58
CLDN9O95484 AC020633.1-201ENST00000468439 2247 ntBASIC5.19□□□□□ -1.58
CLDN9O95484 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
CLDN9O95484 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 SLC26A3-201ENST00000340010 2863 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 DDX18P6-201ENST00000450119 1997 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 ENPP2-207ENST00000522167 1695 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN9O95484 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLDN9O95484 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 AC006484.1-201ENST00000435086 1884 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 RNF19BPY-201ENST00000458209 1550 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CLDN9O95484 OR9G4-201ENST00000302957 984 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN9O95484 CLEC4A-203ENST00000352620 615 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CLDN9O95484 RNA5SP435-201ENST00000364044 108 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 RN7SKP153-201ENST00000365026 316 ntBASIC5.18□□□□□ -1.58
CLDN9O95484 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.18□□□□□ -1.58
CLDN9O95484 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC5.18□□□□□ -1.58
CLDN9O95484 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.18□□□□□ -1.58
CLDN9O95484 AC092634.4-201ENST00000419937 423 ntTSL 3 BASIC5.18□□□□□ -1.58
CLDN9O95484 AL929472.2-201ENST00000419993 481 ntTSL 5 BASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 91.6 ms