Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 VN1R21P-201ENST00000426703 765 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC5.16□□□□□ -1.58
ZIC3O60481 AL645931.1-201ENST00000439737 410 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 YWHAEP1-201ENST00000453697 763 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 RPL32P14-201ENST00000463196 378 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 RPS23P2-201ENST00000463671 415 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC087672.1-201ENST00000479876 766 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 CLEC19A-204ENST00000493231 557 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 AC138866.2-201ENST00000508650 584 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC010460.2-201ENST00000509054 677 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC074087.1-201ENST00000512059 724 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AP003355.1-201ENST00000518956 587 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 AC027544.3-201ENST00000535082 757 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 HSPE1P2-201ENST00000554777 306 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC5.16□□□□□ -1.58
ZIC3O60481 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 AL158211.1-201ENST00000566763 763 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 AC012146.2-201ENST00000576545 416 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 LINC02563-201ENST00000579474 277 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 MIR4505-201ENST00000582238 73 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 PIK3C3-207ENST00000587402 452 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 AF230666.2-201ENST00000602328 725 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 BMS1P7-201ENST00000602440 1052 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC068620.3-201ENST00000602749 560 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC135983.2-201ENST00000604301 628 ntTSL 5 BASIC5.16□□□□□ -1.58
ZIC3O60481 AC027449.1-201ENST00000608890 407 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC5.16□□□□□ -1.58
ZIC3O60481 AL035661.1-201ENST00000620459 1144 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 LINC01620-204ENST00000623295 700 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 AC090506.2-201ENST00000624521 419 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 AC010608.3-201ENST00000625048 527 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 TMEM30CP-203ENST00000637814 1035 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ZIC3O60481 LRRC49-201ENST00000260382 2784 ntAPPRIS P3 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
ZIC3O60481 SELE-204ENST00000367776 3576 ntTSL 5 BASIC5.16□□□□□ -1.58
ZIC3O60481 SELE-205ENST00000367777 3576 ntTSL 5 BASIC5.16□□□□□ -1.58
ZIC3O60481 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
ZIC3O60481 AC027279.4-201ENST00000624371 2072 ntBASIC5.16□□□□□ -1.58
ZIC3O60481 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.15□□□□□ -1.58
ZIC3O60481 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZIC3O60481 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZIC3O60481 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC5.15□□□□□ -1.58
ZIC3O60481 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.15□□□□□ -1.58
ZIC3O60481 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ZIC3O60481 RNMT-201ENST00000262173 6051 ntAPPRIS P1 TSL 2 BASIC5.15□□□□□ -1.58
ZIC3O60481 CLCC1-204ENST00000369968 4151 ntTSL 5 BASIC5.15□□□□□ -1.58
ZIC3O60481 CASP10-202ENST00000286186 5928 ntAPPRIS P4 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZIC3O60481 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ZIC3O60481 VCAN-203ENST00000343200 9455 ntTSL 1 (best) BASIC5.15□□□□□ -1.58
ZIC3O60481 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC5.15□□□□□ -1.58
ZIC3O60481 RN7SKP269-201ENST00000365545 319 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 RNA5SP30-201ENST00000365552 115 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 TEX36-201ENST00000368821 922 ntAPPRIS P3 TSL 1 (best) BASIC5.15□□□□□ -1.59
ZIC3O60481 G6PC2-202ENST00000375363 1214 ntAPPRIS P1 TSL 1 (best) BASIC5.15□□□□□ -1.59
ZIC3O60481 RPL10P10-201ENST00000403509 664 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 NACAP7-201ENST00000407371 609 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 RN7SKP206-201ENST00000410823 293 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 RN7SKP286-201ENST00000410894 299 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 RMRPP5-201ENST00000411156 267 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 RN7SKP293-201ENST00000411389 296 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 ERI3-IT1-201ENST00000414156 619 ntTSL 3 BASIC5.15□□□□□ -1.59
ZIC3O60481 AL596448.1-201ENST00000415024 392 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 AL158050.1-201ENST00000416077 457 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.15□□□□□ -1.59
ZIC3O60481 AL391987.1-201ENST00000441025 200 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 LINC00380-201ENST00000442478 353 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 EEF1B2P6-201ENST00000445713 673 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 RPL12P39-201ENST00000455456 496 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.15□□□□□ -1.59
ZIC3O60481 AC008410.1-201ENST00000483777 339 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 RN7SL101P-201ENST00000496350 279 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 SUMO1P1-201ENST00000497904 306 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 AC008448.1-201ENST00000505109 584 ntTSL 5 BASIC5.15□□□□□ -1.59
ZIC3O60481 AC121161.1-201ENST00000510606 652 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 LINC02432-203ENST00000511213 719 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC5.15□□□□□ -1.59
ZIC3O60481 AC064802.1-201ENST00000521523 866 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 OR8X1P-201ENST00000534542 869 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 LDHC-203ENST00000535809 757 ntTSL 5 BASIC5.15□□□□□ -1.59
ZIC3O60481 LDHC-205ENST00000537486 583 ntTSL 5 BASIC5.15□□□□□ -1.59
ZIC3O60481 CDKN3-206ENST00000541304 1070 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 OR9A4-201ENST00000548136 1093 ntAPPRIS P1 BASIC5.15□□□□□ -1.59
ZIC3O60481 LINC02258-201ENST00000551280 777 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 NPM1P42-201ENST00000560329 862 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 AC087286.1-201ENST00000560712 568 ntTSL 3 BASIC5.15□□□□□ -1.59
ZIC3O60481 AGGF1P7-201ENST00000562369 913 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 AC007431.2-201ENST00000577189 563 ntTSL 2 BASIC5.15□□□□□ -1.59
ZIC3O60481 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC5.15□□□□□ -1.59
ZIC3O60481 AP2S1-210ENST00000601649 315 ntTSL 3 BASIC5.15□□□□□ -1.59
ZIC3O60481 NANOGP3-201ENST00000605855 286 ntBASIC5.15□□□□□ -1.59
ZIC3O60481 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC5.15□□□□□ -1.59
ZIC3O60481 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC5.15□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 73.4 ms