Protein–RNA interactions for Protein: O43347

MSI1, RNA-binding protein Musashi homolog 1, humanhuman

Known RBP Predictions only

Length 362 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSI1O43347 BX470102.1-201ENST00000420695 531 ntTSL 2 BASIC5.85□□□□□ -1.47
MSI1O43347 FAM53B-AS1-201ENST00000432699 558 ntTSL 2 BASIC5.85□□□□□ -1.47
MSI1O43347 AC012075.1-201ENST00000436549 580 ntBASIC5.85□□□□□ -1.47
MSI1O43347 AL445307.1-201ENST00000446476 602 ntTSL 3 BASIC5.85□□□□□ -1.47
MSI1O43347 EIF4A1P6-201ENST00000448133 1210 ntBASIC5.85□□□□□ -1.47
MSI1O43347 AL022329.1-203ENST00000453811 451 ntTSL 3 BASIC5.85□□□□□ -1.47
MSI1O43347 LDHBP2-201ENST00000456969 1005 ntBASIC5.85□□□□□ -1.47
MSI1O43347 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC5.85□□□□□ -1.47
MSI1O43347 SSR3-208ENST00000496050 579 ntTSL 4 BASIC5.85□□□□□ -1.47
MSI1O43347 RN7SL466P-201ENST00000497546 295 ntBASIC5.85□□□□□ -1.47
MSI1O43347 AC008517.1-201ENST00000502383 585 ntTSL 4 BASIC5.85□□□□□ -1.47
MSI1O43347 AC016550.1-201ENST00000505348 785 ntBASIC5.85□□□□□ -1.47
MSI1O43347 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.85□□□□□ -1.47
MSI1O43347 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.85□□□□□ -1.47
MSI1O43347 RNU6-491P-201ENST00000516099 110 ntBASIC5.85□□□□□ -1.47
MSI1O43347 SEC11B-201ENST00000518383 499 ntBASIC5.85□□□□□ -1.47
MSI1O43347 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.85□□□□□ -1.47
MSI1O43347 AC021351.1-202ENST00000561394 701 ntTSL 3 BASIC5.85□□□□□ -1.47
MSI1O43347 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC5.85□□□□□ -1.47
MSI1O43347 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
MSI1O43347 AC090403.1-204ENST00000582893 572 ntTSL 4 BASIC5.85□□□□□ -1.47
MSI1O43347 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.85□□□□□ -1.47
MSI1O43347 BNIP3P40-201ENST00000596017 556 ntBASIC5.85□□□□□ -1.47
MSI1O43347 RPAP2P1-201ENST00000603626 1168 ntBASIC5.85□□□□□ -1.47
MSI1O43347 AL445493.3-201ENST00000619568 477 ntBASIC5.85□□□□□ -1.47
MSI1O43347 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
MSI1O43347 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MSI1O43347 AFP-201ENST00000226359 1914 ntTSL 5 BASIC5.85□□□□□ -1.47
MSI1O43347 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MSI1O43347 SIAH1-202ENST00000380006 3352 ntAPPRIS P3 BASIC5.85□□□□□ -1.47
MSI1O43347 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
MSI1O43347 MIR4500HG-201ENST00000436290 1675 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
MSI1O43347 UGT2A2-202ENST00000604629 1676 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
MSI1O43347 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
MSI1O43347 AC006288.1-201ENST00000565320 1463 ntTSL 3 BASIC5.84□□□□□ -1.47
MSI1O43347 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC5.84□□□□□ -1.47
MSI1O43347 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
MSI1O43347 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC5.84□□□□□ -1.47
MSI1O43347 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MSI1O43347 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
MSI1O43347 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.84□□□□□ -1.47
MSI1O43347 MIR620-201ENST00000385232 95 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AL356057.1-202ENST00000402263 756 ntBASIC5.84□□□□□ -1.47
MSI1O43347 ZSCAN12P1-201ENST00000406489 419 ntBASIC5.84□□□□□ -1.47
MSI1O43347 EIF4A1P7-201ENST00000421800 1220 ntBASIC5.84□□□□□ -1.47
MSI1O43347 KRT8P51-201ENST00000438938 274 ntBASIC5.84□□□□□ -1.47
MSI1O43347 RNF2P1-201ENST00000442955 1010 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AL450996.1-201ENST00000445574 1202 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MSI1O43347 AL450023.1-201ENST00000450868 751 ntBASIC5.84□□□□□ -1.47
MSI1O43347 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC5.84□□□□□ -1.47
MSI1O43347 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC5.84□□□□□ -1.47
MSI1O43347 C1GALT1P2-201ENST00000510813 1104 ntBASIC5.84□□□□□ -1.47
MSI1O43347 MTATP6P9-201ENST00000515039 680 ntBASIC5.84□□□□□ -1.47
MSI1O43347 SNORA70.11-201ENST00000515987 138 ntBASIC5.84□□□□□ -1.47
MSI1O43347 SNORA70.13-201ENST00000516116 138 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AC025370.1-201ENST00000523775 583 ntTSL 5 BASIC5.84□□□□□ -1.47
MSI1O43347 AC092078.1-201ENST00000558370 325 ntTSL 3 BASIC5.84□□□□□ -1.47
MSI1O43347 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC5.84□□□□□ -1.47
MSI1O43347 MIR4443-201ENST00000585052 53 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC5.84□□□□□ -1.47
MSI1O43347 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC5.84□□□□□ -1.47
MSI1O43347 ABI1P1-201ENST00000603375 1120 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AL589674.2-201ENST00000604304 337 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AL450270.1-201ENST00000606160 391 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AC120053.1-201ENST00000607706 736 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AC016957.2-201ENST00000616998 848 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AL049777.1-201ENST00000622740 518 ntBASIC5.84□□□□□ -1.47
MSI1O43347 AL691477.1-201ENST00000624398 162 ntBASIC5.84□□□□□ -1.47
MSI1O43347 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.84□□□□□ -1.47
MSI1O43347 ARHGEF12-213ENST00000532993 8753 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MSI1O43347 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.84□□□□□ -1.47
MSI1O43347 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
MSI1O43347 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.84□□□□□ -1.47
MSI1O43347 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
MSI1O43347 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.84□□□□□ -1.48
MSI1O43347 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 IL23R-202ENST00000395227 1459 ntTSL 3 BASIC5.83□□□□□ -1.48
MSI1O43347 GRID2-204ENST00000510992 2739 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MSI1O43347 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
MSI1O43347 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 AC011604.2-201ENST00000381541 2268 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MSI1O43347 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 KCNJ16-202ENST00000392670 4009 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
MSI1O43347 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.83□□□□□ -1.48
MSI1O43347 KYNUP3-201ENST00000574386 1341 ntBASIC5.83□□□□□ -1.48
MSI1O43347 AC027279.4-201ENST00000624371 2072 ntBASIC5.83□□□□□ -1.48
MSI1O43347 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
MSI1O43347 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 LINC01277-201ENST00000419957 2398 ntTSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 RPL39P5-201ENST00000273411 449 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
MSI1O43347 MIR421-201ENST00000365696 85 ntBASIC5.83□□□□□ -1.48
MSI1O43347 AC005042.1-201ENST00000393397 800 ntBASIC5.83□□□□□ -1.48
MSI1O43347 RPL11P3-201ENST00000395256 523 ntBASIC5.83□□□□□ -1.48
MSI1O43347 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.83□□□□□ -1.48
MSI1O43347 AC011752.1-203ENST00000417609 582 ntTSL 2 BASIC5.83□□□□□ -1.48
MSI1O43347 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 156 ms