Protein–RNA interactions for Protein: O15239

NDUFA1, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 1, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA1O15239 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC3.61□□□□□ -1.83
NDUFA1O15239 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC3.61□□□□□ -1.83
NDUFA1O15239 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 CSMD3-203ENST00000343508 13018 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC3.6□□□□□ -1.83
NDUFA1O15239 IFIT1B-201ENST00000371809 1972 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 R3HCC1L-202ENST00000314594 3198 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 SSR1-202ENST00000397511 3248 ntTSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
NDUFA1O15239 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 AC023490.2-201ENST00000359859 470 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 RNA5SP433-201ENST00000364491 114 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 RNU4-2-201ENST00000365668 141 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 OOSP1-201ENST00000398992 1270 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC3.6□□□□□ -1.83
NDUFA1O15239 AC099654.1-202ENST00000415836 564 ntTSL 4 BASIC3.6□□□□□ -1.83
NDUFA1O15239 EEF1A1P29-201ENST00000416082 1096 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC3.6□□□□□ -1.83
NDUFA1O15239 AC127526.2-201ENST00000426436 775 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 AL512637.1-201ENST00000439523 1231 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC3.6□□□□□ -1.83
NDUFA1O15239 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC3.6□□□□□ -1.83
NDUFA1O15239 AP006222.1-205ENST00000450734 457 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 BX842559.2-201ENST00000451418 605 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 DNAJB5P1-201ENST00000454004 806 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 CTSLP6-201ENST00000458273 1002 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 GSTM1-206ENST00000483399 512 ntTSL 3 BASIC3.6□□□□□ -1.83
NDUFA1O15239 RPL7P41-201ENST00000485823 957 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 ASNSP4-201ENST00000511103 447 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 MTND6P2-201ENST00000512226 524 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 SCARNA16.4-201ENST00000516956 187 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 PKIA-AS1-201ENST00000519242 995 ntTSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 AC040934.1-201ENST00000523101 513 ntTSL 2 BASIC3.6□□□□□ -1.83
NDUFA1O15239 MRPS16P1-201ENST00000523462 412 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 ANAPC15-205ENST00000535503 734 ntAPPRIS P3 TSL 3 BASIC3.6□□□□□ -1.83
NDUFA1O15239 WDR61-205ENST00000558459 884 ntTSL 3 BASIC3.6□□□□□ -1.83
NDUFA1O15239 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 AC093524.1-201ENST00000564266 1094 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 MIR744-201ENST00000578242 98 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 AP005403.1-201ENST00000579720 229 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 AC006272.2-201ENST00000594725 163 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 AC073593.1-201ENST00000624500 411 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC3.6□□□□□ -1.83
NDUFA1O15239 5S_rRNA.28-201ENST00000638107 119 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 AC097063.1-201ENST00000426714 1797 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 C6-202ENST00000337836 3551 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
NDUFA1O15239 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 ABI1-206ENST00000376140 1446 ntTSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 IFIT1P1-201ENST00000400497 1449 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 AC106872.5-201ENST00000508856 1416 ntBASIC3.6□□□□□ -1.83
NDUFA1O15239 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC3.6□□□□□ -1.83
NDUFA1O15239 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
NDUFA1O15239 ADAM2-207ENST00000622267 2480 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
NDUFA1O15239 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC3.6□□□□□ -1.83
NDUFA1O15239 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDUFA1O15239 PUS7L-201ENST00000344862 13593 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDUFA1O15239 BTBD10-210ENST00000530907 1871 ntAPPRIS ALT1 TSL 2 BASIC3.59□□□□□ -1.83
NDUFA1O15239 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDUFA1O15239 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC3.59□□□□□ -1.83
NDUFA1O15239 OR7E25P-201ENST00000344844 931 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
NDUFA1O15239 RNA5SP131-201ENST00000365452 119 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 RN7SKP292-201ENST00000365522 317 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 HMGB1P20-201ENST00000402555 677 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 LINC00701-201ENST00000418295 742 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NDUFA1O15239 CYCSP34-201ENST00000458172 304 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 AC092754.1-201ENST00000472975 479 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 AP002884.1-201ENST00000479691 655 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC3.59□□□□□ -1.83
NDUFA1O15239 RN7SL447P-201ENST00000494711 245 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC3.59□□□□□ -1.83
NDUFA1O15239 RPL37-204ENST00000508493 553 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDUFA1O15239 BTG4P1-201ENST00000510421 183 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 RNA5SP271-201ENST00000516700 88 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC3.59□□□□□ -1.83
NDUFA1O15239 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC3.59□□□□□ -1.83
NDUFA1O15239 AC109466.1-202ENST00000523648 748 ntTSL 3 BASIC3.59□□□□□ -1.83
NDUFA1O15239 ATXN3-215ENST00000532032 1191 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NDUFA1O15239 AC068305.2-201ENST00000550567 1205 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 SETP1-201ENST00000556014 845 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC3.59□□□□□ -1.83
NDUFA1O15239 MRPS21P7-201ENST00000566937 238 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 AC007639.1-201ENST00000577281 833 ntTSL 3 BASIC3.59□□□□□ -1.83
NDUFA1O15239 AC016839.1-201ENST00000578162 867 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 AC067773.1-201ENST00000603284 1094 ntBASIC3.59□□□□□ -1.83
NDUFA1O15239 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC3.59□□□□□ -1.83
NDUFA1O15239 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
NDUFA1O15239 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC3.59□□□□□ -1.83
NDUFA1O15239 KCNJ6-201ENST00000609713 19645 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
NDUFA1O15239 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.59□□□□□ -1.83
NDUFA1O15239 CLDND1-208ENST00000503004 2818 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.84
NDUFA1O15239 MRE11P1-201ENST00000464884 2127 ntBASIC3.59□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 127.4 ms