Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 RNU6-1320P-201ENST00000390838 107 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 RNU6-1269P-201ENST00000391139 107 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AL445238.1-204ENST00000400311 463 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TRIM38O00635 LSM5-206ENST00000409987 504 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 RPS7P8-201ENST00000418311 581 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 USP24P1-201ENST00000433802 779 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AL731534.1-201ENST00000434711 269 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM38O00635 RNFT1P2-201ENST00000443064 757 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 ZNF619P1-201ENST00000446539 752 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 CASP12-206ENST00000446862 1196 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 NPM1P19-201ENST00000450070 712 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 CLIC4P1-201ENST00000453177 535 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AC023141.9-201ENST00000458734 412 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 RNU6-599P-201ENST00000459383 107 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 RNU6-1193P-201ENST00000459461 107 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 RN7SL717P-201ENST00000478343 297 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AC010343.3-202ENST00000510327 619 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM38O00635 LECT2-205ENST00000522943 574 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM38O00635 IGHVIII-67-4-201ENST00000524281 296 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AC018793.4-201ENST00000524542 585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM38O00635 AC109635.6-201ENST00000525487 1113 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 PARPBP-212ENST00000543784 992 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM38O00635 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.98□□□□□ -1.45
TRIM38O00635 AP001007.3-201ENST00000560744 356 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 AC024361.3-201ENST00000570919 333 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 AP000897.2-201ENST00000579509 1057 ntTSL 3 BASIC5.98□□□□□ -1.45
TRIM38O00635 SNORD95-201ENST00000579879 68 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AP005120.1-202ENST00000584321 506 ntTSL 4 BASIC5.98□□□□□ -1.45
TRIM38O00635 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 MIR132-201ENST00000591554 101 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 ZNF836-203ENST00000597065 808 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.98□□□□□ -1.45
TRIM38O00635 AC079880.2-201ENST00000603790 1213 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AC008555.7-201ENST00000605008 583 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AC073137.1-201ENST00000605636 634 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AC112503.2-201ENST00000609005 552 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AL391834.1-201ENST00000609609 560 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AL157392.4-201ENST00000609756 345 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC5.98□□□□□ -1.45
TRIM38O00635 ELSPBP1-206ENST00000619003 893 ntAPPRIS ALT2 TSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 AC022306.3-201ENST00000619930 550 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 RNU6-368P-201ENST00000620928 107 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 RNU6-538P-201ENST00000622329 107 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AL049777.1-201ENST00000622740 518 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AC007683.2-201ENST00000624681 714 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 MAPKBP1-217ENST00000627631 210 ntTSL 5 BASIC5.98□□□□□ -1.45
TRIM38O00635 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM38O00635 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM38O00635 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.98□□□□□ -1.45
TRIM38O00635 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
TRIM38O00635 CAMSAP2-201ENST00000236925 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 RABGAP1L-206ENST00000367688 1425 ntTSL 2 BASIC5.98□□□□□ -1.45
TRIM38O00635 RARSP1-201ENST00000542842 1418 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.98□□□□□ -1.45
TRIM38O00635 AL022393.1-201ENST00000625142 1677 ntBASIC5.98□□□□□ -1.45
TRIM38O00635 METTL6-203ENST00000443029 4020 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 AL592429.1-201ENST00000403909 1473 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 ADAMTS9-AS2-201ENST00000460833 3691 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 MAP3K19-204ENST00000392915 5030 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC5.97□□□□□ -1.45
TRIM38O00635 OR51Q1-201ENST00000300778 1096 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
TRIM38O00635 CRYGS-201ENST00000307944 759 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 SNORA43.1-201ENST00000364863 140 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 RN7SKP186-201ENST00000365371 303 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 CRP-204ENST00000368112 787 ntTSL 2 BASIC5.97□□□□□ -1.45
TRIM38O00635 DAOA-202ENST00000375936 742 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 HMGB1P10-201ENST00000395823 563 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 CHMP1B2P-201ENST00000399581 597 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 RNU4-74P-201ENST00000411280 161 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AC245060.4-201ENST00000413293 1121 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 AL354868.1-201ENST00000417077 482 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 BX284632.2-201ENST00000421091 399 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 NDUFA5P10-201ENST00000432147 357 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM38O00635 ARAFP2-201ENST00000440565 559 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AL512605.1-202ENST00000441919 381 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AL353743.2-203ENST00000443630 492 ntTSL 3 BASIC5.97□□□□□ -1.45
TRIM38O00635 TRIM60P16-201ENST00000444048 694 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
TRIM38O00635 AL359955.2-201ENST00000445380 353 ntBASIC5.97□□□□□ -1.45
TRIM38O00635 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC5.97□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms