Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 BNIP3P1-201ENST00000547295 580 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 AC009803.1-202ENST00000551940 544 ntTSL 4 BASIC5.29□□□□□ -1.56
PDLIM1O00151 CLMN-206ENST00000556441 452 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 PCLAF-203ENST00000558008 766 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM1O00151 THSD4-AS1-201ENST00000561571 554 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AC005726.4-201ENST00000582858 458 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 LINC01533-201ENST00000585739 616 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AC105094.2-202ENST00000590968 566 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM1O00151 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AL353804.2-201ENST00000603360 347 ntTSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 MIR6793-201ENST00000612376 63 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 AP005212.4-201ENST00000614206 710 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 CDKN2B-AS_3.1-201ENST00000617587 144 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AC073869.10-201ENST00000642016 354 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM1O00151 OTUD4-202ENST00000454497 7069 ntTSL 2 BASIC5.29□□□□□ -1.56
PDLIM1O00151 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM1O00151 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDLIM1O00151 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
PDLIM1O00151 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
PDLIM1O00151 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
PDLIM1O00151 AC079097.1-201ENST00000512187 1399 ntBASIC5.29□□□□□ -1.56
PDLIM1O00151 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC011503.2-201ENST00000594230 1500 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 LINC00343-202ENST00000415294 1320 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM1O00151 EEF1A1P21-201ENST00000512363 1344 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 BDNF-AS-202ENST00000499568 2039 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 AKAP4-201ENST00000358526 2881 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 MRPL35-202ENST00000337109 3727 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 KRR1-201ENST00000229214 10118 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 REP15-201ENST00000310791 1078 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PDLIM1O00151 OR11H6-201ENST00000315519 993 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PDLIM1O00151 RNA5SP477-201ENST00000362639 119 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 SVBP-202ENST00000372522 650 ntAPPRIS P1 TSL 3 BASIC5.28□□□□□ -1.56
PDLIM1O00151 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC007068.1-201ENST00000396690 844 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 HSD17B7P1-201ENST00000412419 1017 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM1O00151 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC066692.1-201ENST00000421721 457 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 KIF4CP-201ENST00000422742 1279 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM1O00151 PCBP2P1-201ENST00000437262 977 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 AC073587.1-201ENST00000447093 876 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 AL031584.1-201ENST00000447169 754 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC073130.1-202ENST00000454897 587 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM1O00151 RN7SL193P-201ENST00000491708 276 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC060775.1-201ENST00000518241 520 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 WASHC5-AS1-201ENST00000519140 587 ntTSL 4 BASIC5.28□□□□□ -1.56
PDLIM1O00151 KCTD9P6-201ENST00000522306 950 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM1O00151 PCED1B-AS1-203ENST00000547626 420 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC103996.3-201ENST00000553477 442 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC005244.2-201ENST00000585228 718 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC018761.4-201ENST00000585742 272 ntTSL 3 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AC145423.1-201ENST00000605712 336 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 OR8G7P-201ENST00000616658 848 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC5.28□□□□□ -1.56
PDLIM1O00151 AL359742.1-201ENST00000622497 540 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 FO681491.1-202ENST00000623392 737 ntBASIC5.28□□□□□ -1.56
PDLIM1O00151 OR5H15-202ENST00000641450 1229 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
PDLIM1O00151 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC5.28□□□□□ -1.56
PDLIM1O00151 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
PDLIM1O00151 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
PDLIM1O00151 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
PDLIM1O00151 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 PAK3-213ENST00000620137 2130 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 LDHAL6CP-202ENST00000550738 3224 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 FAP-203ENST00000443424 2598 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM1O00151 SLC9B1P1-201ENST00000331172 1337 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 AC022417.1-201ENST00000624768 1303 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.27□□□□□ -1.57
PDLIM1O00151 PMCHL1-201ENST00000418902 1917 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 TATDN1-201ENST00000276692 1018 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 SELENOWP1-201ENST00000322792 252 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 MYO3A-202ENST00000376301 727 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AL672167.2-201ENST00000377164 879 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 SUGT1P2-201ENST00000379452 992 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 ZRSR2-202ENST00000380308 744 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 MIR130A-201ENST00000385274 89 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
PDLIM1O00151 AL354890.1-201ENST00000413730 346 ntBASIC5.27□□□□□ -1.57
PDLIM1O00151 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC5.27□□□□□ -1.57
PDLIM1O00151 AC114803.1-201ENST00000417355 311 ntTSL 3 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 230.3 ms