Protein–RNA interactions for Protein: A6NFN3

RBFOX3, RNA binding protein fox-1 homolog 3, humanhuman

Predictions only

Length 312 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX3A6NFN3 SAMD13-206ENST00000394834 785 ntAPPRIS P1 TSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 IL6-203ENST00000401651 539 ntTSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 HIST1H3PS1-201ENST00000404612 417 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 MARK2P12-201ENST00000420129 585 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 RC3H1-IT1-201ENST00000421851 448 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 LCE6A-201ENST00000431011 628 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AL162386.2-201ENST00000442428 457 ntTSL 3 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC011752.1-201ENST00000451476 494 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC092865.4-201ENST00000477936 615 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC073610.1-201ENST00000489971 396 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AGGF1P3-201ENST00000493675 1213 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC122718.2-201ENST00000505325 591 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC113382.2-201ENST00000506911 646 ntTSL 3 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AL671862.1-201ENST00000515851 349 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC078864.1-201ENST00000547538 512 ntTSL 4 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC020661.4-201ENST00000561388 500 ntTSL 3 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 MIR4260-201ENST00000583107 67 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 RMDN2-AS1-203ENST00000601029 613 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 XIST-210ENST00000602863 775 ntTSL 3 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC087468.1-201ENST00000604365 630 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC009779.8-202ENST00000607990 932 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC073575.2-201ENST00000614212 627 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC025262.3-201ENST00000623666 360 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AP001052.1-201ENST00000626421 99 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 HMBOX1-202ENST00000355231 1694 ntTSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 AC090181.3-201ENST00000624777 1514 ntBASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 MYBPC1-204ENST00000452455 3861 ntAPPRIS ALT2 TSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 MIR99AHG-219ENST00000619222 3476 ntTSL 2 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
RBFOX3A6NFN3 TCHHL1-201ENST00000368806 3603 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 SMARCA2-201ENST00000302401 2242 ntTSL 2 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RSU1P2-203ENST00000448600 1582 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 NAT1-208ENST00000520546 1446 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 LINC00615-201ENST00000546725 1406 ntTSL 2 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 ZNF729-201ENST00000601693 3877 ntAPPRIS P1 TSL 2 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 NUP37-201ENST00000251074 1203 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 LINC00314-201ENST00000324988 607 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RNA5SP232-201ENST00000364144 119 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AL139805.1-201ENST00000407837 289 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RN7SKP29-201ENST00000410957 272 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC007161.1-204ENST00000423039 460 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC124944.2-201ENST00000429866 1242 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC007283.1-201ENST00000434645 445 ntTSL 5 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 LINC02094-201ENST00000437646 520 ntTSL 2 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 TIMM8BP2-201ENST00000445940 251 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 MRPL35P2-201ENST00000448009 511 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC118758.1-202ENST00000454719 225 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 CYCSP34-201ENST00000458172 304 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AP002371.1-201ENST00000463604 433 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RN7SL168P-201ENST00000463821 279 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC093827.1-201ENST00000480094 861 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RN7SL741P-201ENST00000482473 289 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 ARL4AP1-201ENST00000503220 705 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC122710.1-201ENST00000510622 553 ntTSL 5 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC108103.1-201ENST00000511286 446 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 RFPL4AP5-201ENST00000514977 504 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 SNORA74.1-201ENST00000516320 180 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC090809.1-201ENST00000524132 570 ntTSL 4 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 MIR670HG-201ENST00000533531 897 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 OLR1-209ENST00000543993 822 ntTSL 2 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 LINC01580-202ENST00000555364 661 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC079075.2-201ENST00000557964 449 ntTSL 4 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC010401.2-202ENST00000570663 396 ntTSL 2 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 IGKV2OR2-1-201ENST00000605129 304 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AC067838.1-201ENST00000606064 577 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 AL159169.2-201ENST00000610061 1269 ntBASIC4.23□□□□□ -1.73
RBFOX3A6NFN3 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 116.1 ms