Protein–RNA interactions for Protein: A0A578

TCRBV5S1A1T, T-cell receptor beta variable 5-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV5S1A1TA0A578 AC008691.1-209ENST00000642094 814 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC015689.2-201ENST00000528172 1738 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 CYLD-203ENST00000427738 8503 ntTSL 5 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC140134.1-201ENST00000511830 3544 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 SLCO1C1-209ENST00000545604 2557 ntTSL 2 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 YES1P1-201ENST00000418510 1628 ntBASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC5.84□□□□□ -1.47
TCRBV5S1A1TA0A578 KAT6A-202ENST00000396930 9285 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.48
TCRBV5S1A1TA0A578 ZEB1-219ENST00000560721 3368 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.48
TCRBV5S1A1TA0A578 NSUN3-201ENST00000314622 3289 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
TCRBV5S1A1TA0A578 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 ZNF418-205ENST00000595830 3543 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 PUS10-203ENST00000407787 1820 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 CASC19-255ENST00000641733 1385 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 DMTF1-204ENST00000413276 3548 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC022893.1-201ENST00000517664 3549 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 RNU6-792P-201ENST00000363490 107 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 USMG5-203ENST00000369811 635 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC087276.2-201ENST00000394183 183 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 VN1R51P-201ENST00000411675 945 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 RPL7P56-201ENST00000429441 717 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 OR6D1P-201ENST00000436165 939 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 ARL5AP3-201ENST00000439327 386 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC073109.1-201ENST00000445066 978 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 snoU109.3-201ENST00000459477 145 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC068756.1-201ENST00000482003 403 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 PRELID3BP6-201ENST00000503839 571 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 MTCO3P27-201ENST00000514397 196 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC02358-201ENST00000514413 465 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 SNORD46.2-201ENST00000516021 102 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 C8orf22-203ENST00000517663 788 ntAPPRIS ALT1 TSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AP003355.1-201ENST00000518956 587 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC104115.2-201ENST00000523026 687 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC025300.1-201ENST00000526616 384 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC079064.1-201ENST00000528365 362 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AP004609.2-201ENST00000532177 190 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC079600.1-201ENST00000550326 297 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC009019.1-203ENST00000568603 515 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 H3F3BP2-201ENST00000583907 357 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC007786.3-201ENST00000615154 596 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 Metazoa_SRP.170-201ENST00000616060 254 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AL513314.2-202ENST00000617077 536 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 PHACTR2P1-202ENST00000636592 773 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 LINC01837-206ENST00000636649 1056 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 AC087258.1-203ENST00000545400 1629 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 STON1-202ENST00000406226 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 BNIP2-202ENST00000415213 1509 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 GHR-210ENST00000615111 4814 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 EPS15P1-202ENST00000459691 2071 ntBASIC5.83□□□□□ -1.48
TCRBV5S1A1TA0A578 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 ZNF33A-203ENST00000432900 3994 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 MPDZ-212ENST00000538841 3186 ntTSL 2 BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 UGT2A1-205ENST00000512704 2519 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 EPB41L2-220ENST00000528282 3663 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 ADGB-205ENST00000397944 5325 ntAPPRIS P5 TSL 5 BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 TMEM200A-202ENST00000392429 5017 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 MT-RNR2-201ENST00000387347 1559 ntBASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 U3.28-201ENST00000391249 210 ntBASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 AL050305.1-201ENST00000399993 1230 ntBASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 RMRPP5-201ENST00000411156 267 ntBASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 AL024507.1-201ENST00000412741 274 ntBASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 AL133482.1-201ENST00000415988 498 ntBASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 RPS3P2-201ENST00000421346 701 ntBASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 MTCO2P23-201ENST00000425216 680 ntBASIC5.82□□□□□ -1.48
TCRBV5S1A1TA0A578 MTND2P21-201ENST00000436242 1042 ntBASIC5.82□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms