Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 ENPP3-203ENST00000414305 3418 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC244035.2-201ENST00000425896 630 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 MTND6P12-201ENST00000428247 522 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC005189.1-201ENST00000431286 310 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC023141.3-201ENST00000436698 278 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 MTCYBP31-201ENST00000438855 1122 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 VN1R25P-201ENST00000443385 738 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AL096803.2-201ENST00000450032 677 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC112187.1-201ENST00000455837 479 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC018717.1-201ENST00000457712 1505 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 NXT1P1-201ENST00000458481 316 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC110749.1-201ENST00000462007 357 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC073594.1-201ENST00000462065 364 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AL355032.1-201ENST00000472981 438 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC007998.1-201ENST00000474156 672 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC104803.1-201ENST00000506917 529 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 Y_RNA.710-201ENST00000516975 110 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 UQCRB-204ENST00000518406 595 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC091185.1-201ENST00000523840 528 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 OR10V3P-201ENST00000525712 725 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 DUXAP5-201ENST00000529668 529 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC087888.1-201ENST00000550884 1254 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 ZNF971P-201ENST00000562068 1249 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC007494.1-201ENST00000562293 760 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC103810.5-201ENST00000581622 560 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 FAM106CP-201ENST00000582212 507 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 VN1R87P-201ENST00000596706 487 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AP001823.1-201ENST00000604056 1003 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC002487.1-201ENST00000604565 994 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AL133243.2-201ENST00000610331 1621 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC015574.1-205ENST00000611285 524 ntTSL 5 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AL035461.2-201ENST00000619201 524 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AC129778.1-202ENST00000623812 261 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AL591379.1-207ENST00000635982 261 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 AMYH02020865.1-205ENST00000636189 261 ntBASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 LINC02523-201ENST00000423208 2963 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
PCDHB1Q9Y5F3 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 MNS1-201ENST00000260453 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 CD69-201ENST00000228434 1676 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 CFAP70-202ENST00000340329 1403 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 MGC32805-205ENST00000510972 1424 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RARSP1-201ENST00000542842 1418 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 TMSB4XP4-201ENST00000323496 618 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 OR14A16-201ENST00000357627 930 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 LEMD1-203ENST00000367152 741 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AL672167.2-201ENST00000377164 879 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RNA5SP284-201ENST00000384547 118 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AL359636.2-201ENST00000412262 259 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RPL12P28-201ENST00000430852 489 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 MTCO2P20-201ENST00000437339 673 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AL353662.1-201ENST00000439099 327 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 ATP6V1E1P1-201ENST00000439215 681 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 Z77249.1-201ENST00000444622 1175 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RPL23AP60-201ENST00000450011 454 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RN7SL177P-201ENST00000476596 299 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RN7SL284P-201ENST00000498823 275 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 BMPR1B-204ENST00000502683 567 ntTSL 4 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AC025459.1-201ENST00000504072 156 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AC005351.1-201ENST00000511152 786 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 MEF2C-AS1-208ENST00000512585 741 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 RN7SKP34-201ENST00000516142 244 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 PCAT1-201ENST00000519319 734 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AP000873.2-204ENST00000530825 375 ntTSL 3 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AC027544.3-201ENST00000535082 757 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AL356801.1-201ENST00000559320 294 ntBASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC6.11□□□□□ -1.43
PCDHB1Q9Y5F3 AC048382.2-201ENST00000560239 492 ntTSL 2 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms