Protein–RNA interactions for Protein: Q9P244

LRFN1, Leucine-rich repeat and fibronectin type III domain-containing protein 1, humanhuman

Predictions only

Length 771 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1Q9P244 AL365184.1-201ENST00000413801 572 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 ARPP21-AS1-201ENST00000415706 542 ntTSL 4 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 RPS3P2-201ENST00000421346 701 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 PTP4A1P7-201ENST00000423476 514 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC097721.1-201ENST00000427150 1253 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC011242.1-201ENST00000433596 1158 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 GAPDHP23-201ENST00000444823 993 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AL096803.2-201ENST00000450032 677 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC110749.1-201ENST00000462007 357 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 MLF1-205ENST00000469452 1098 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 LINC02000-201ENST00000483245 640 ntTSL 2 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 HMGB1P38-201ENST00000490557 577 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 TPT1P8-201ENST00000510120 555 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC108471.1-201ENST00000513977 287 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 RNA5SP340-201ENST00000517132 107 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 LINCR-0001-202ENST00000518098 524 ntTSL 4 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AP002370.2-201ENST00000531424 545 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 PTER-205ENST00000535784 1203 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 LINC02327-205ENST00000550990 472 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AL355075.2-201ENST00000555435 478 ntTSL 2 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 RPA2P1-201ENST00000556557 721 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC022929.1-201ENST00000560675 823 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC010735.1-201ENST00000567305 1026 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC068408.2-201ENST00000584566 439 ntTSL 3 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AP002802.2-201ENST00000605877 235 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 RNU6-1192P-201ENST00000612197 107 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 FRG1HP-204ENST00000617940 757 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 RNU6-489P-201ENST00000618289 107 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AL512427.1-201ENST00000618593 349 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC006840.1-201ENST00000623069 542 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC073488.3-201ENST00000631611 778 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 GCNT2-201ENST00000265012 4214 ntAPPRIS P3 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 PHF7-211ENST00000615126 1328 ntTSL 5 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 MEF2C-225ENST00000625585 3467 ntAPPRIS ALT1 TSL 5 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AP2B1-211ENST00000610402 3204 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 AC022325.1-201ENST00000502748 2199 ntBASIC5.66□□□□□ -1.5
LRFN1Q9P244 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC5.66□□□□□ -1.5
LRFN1Q9P244 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
LRFN1Q9P244 BX322639.1-201ENST00000609841 6590 ntTSL 4 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 ZNF138-204ENST00000437743 2574 ntAPPRIS ALT2 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 FAM13A-AS1-201ENST00000500765 3210 ntTSL 2 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC022034.1-201ENST00000512867 2156 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 NAPEPLD-203ENST00000417955 4988 ntAPPRIS P1 TSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 SNORA51.1-201ENST00000363243 140 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 PAGE2-202ENST00000374968 551 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 SUGT1P2-201ENST00000379452 992 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC013404.1-201ENST00000413068 249 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC245096.1-201ENST00000413104 546 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 CLYBL-AS1-201ENST00000416009 621 ntTSL 3 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 LINC00310-202ENST00000419881 910 ntTSL 5 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 CYP4F30P-202ENST00000420048 405 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 ODF2-AS1-201ENST00000420801 407 ntTSL 3 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AL080316.1-201ENST00000432438 499 ntTSL 2 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 SLC6A13-202ENST00000436453 1101 ntTSL 1 (best) BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 ARF4P4-201ENST00000439608 520 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AP000302.1-201ENST00000450928 666 ntTSL 2 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC022431.1-201ENST00000450941 438 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 CFL1P4-201ENST00000451536 498 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 GTF2IP12-201ENST00000456547 356 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 RPL7AP52-201ENST00000458096 790 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC084754.1-201ENST00000463466 464 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC093719.1-201ENST00000480427 441 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 LINC02005-201ENST00000498832 782 ntTSL 3 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC008427.1-201ENST00000503102 655 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 RNA5SP434-201ENST00000516647 121 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC027026.1-201ENST00000532323 742 ntBASIC5.65□□□□□ -1.5
LRFN1Q9P244 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC5.65□□□□□ -1.5
LRFN1Q9P244 AC130462.1-201ENST00000548144 549 ntTSL 5 BASIC5.65□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms