Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 AC020633.1-201ENST00000468439 2247 ntBASIC6.03□□□□□ -1.44
CCSER1Q9C0I3 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCSER1Q9C0I3 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
CCSER1Q9C0I3 GJA9-201ENST00000357771 1799 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
CCSER1Q9C0I3 TRAPPC13-201ENST00000231526 2715 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
CCSER1Q9C0I3 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
CCSER1Q9C0I3 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
CCSER1Q9C0I3 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 ZNF534-202ENST00000332323 2086 ntAPPRIS P4 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 RNU1-19P-201ENST00000363306 165 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 OR1L6-202ENST00000373684 1044 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 RNA5SP487-201ENST00000410186 122 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 MGAT2P2-201ENST00000427194 797 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 NPM1P48-201ENST00000436002 853 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC100832.1-201ENST00000471945 383 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC098976.1-201ENST00000513014 541 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC063979.2-201ENST00000513767 958 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 ATP5LP3-201ENST00000514223 304 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC009027.1-201ENST00000604510 479 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 DARS-AS1-225ENST00000615163 824 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 MIR8080-201ENST00000622224 89 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 RMST-209ENST00000639542 3269 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 DAZ4-205ENST00000440066 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 CASC19-248ENST00000641674 1356 ntBASIC6.02□□□□□ -1.45
CCSER1Q9C0I3 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 GPATCH11-201ENST00000281932 3570 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 PI15-202ENST00000523773 1413 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 EEF1A1-210ENST00000610520 3447 ntTSL 5 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 MTCO1P11-201ENST00000429111 1528 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 ITGAV-204ENST00000433736 3288 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 RN7SKP160-201ENST00000363804 340 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 SNORA5.1-201ENST00000384275 131 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 OR4K12P-201ENST00000406538 961 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 LINC02518-201ENST00000421737 524 ntTSL 3 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 DSTNP5-201ENST00000427921 523 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 GAPDHP14-201ENST00000450472 937 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 DNAJB5P1-201ENST00000454004 806 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 OR2A3P-201ENST00000493774 953 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 AC016559.2-201ENST00000510759 359 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 AC027369.5-201ENST00000533838 755 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 PIWIL4-203ENST00000537419 831 ntTSL 2 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 YWHABP2-201ENST00000540201 713 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 CLMN-206ENST00000556441 452 ntTSL 5 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 AC007225.2-201ENST00000562529 256 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 AC027216.1-201ENST00000577726 685 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 AL022394.1-201ENST00000606979 292 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 CU638689.1-201ENST00000623225 897 ntTSL 3 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 CU634019.4-201ENST00000623347 897 ntTSL 3 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 MTCO1P1-201ENST00000624263 1081 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 CPNE4-214ENST00000617767 3556 ntTSL 2 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 NAMPTP1-201ENST00000440465 2514 ntBASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 CCNE2-202ENST00000396133 1361 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 BANK1-203ENST00000444316 3141 ntTSL 2 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.01□□□□□ -1.45
CCSER1Q9C0I3 CIR1P2-201ENST00000514821 1342 ntBASIC6□□□□□ -1.45
CCSER1Q9C0I3 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCSER1Q9C0I3 BPIFC-201ENST00000300399 1980 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
CCSER1Q9C0I3 CEP164P1-202ENST00000456938 2472 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCSER1Q9C0I3 ADGRG2-203ENST00000356606 4630 ntTSL 1 (best) BASIC6□□□□□ -1.45
CCSER1Q9C0I3 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC6□□□□□ -1.45
CCSER1Q9C0I3 MPDZ-208ENST00000447879 6262 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
CCSER1Q9C0I3 OR9G4-201ENST00000302957 984 ntBASIC6□□□□□ -1.45
CCSER1Q9C0I3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC6□□□□□ -1.45
CCSER1Q9C0I3 RN7SKP229-201ENST00000410465 302 ntBASIC6□□□□□ -1.45
CCSER1Q9C0I3 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC6□□□□□ -1.45
CCSER1Q9C0I3 TMEM244-202ENST00000438392 565 ntAPPRIS P1 TSL 5 BASIC6□□□□□ -1.45
CCSER1Q9C0I3 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC6□□□□□ -1.45
CCSER1Q9C0I3 RPL7P45-201ENST00000455851 743 ntBASIC6□□□□□ -1.45
CCSER1Q9C0I3 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC6□□□□□ -1.45
CCSER1Q9C0I3 AC079168.1-201ENST00000458741 345 ntBASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms