Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 PLEKHH2-201ENST00000282406 6981 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 KIAA0586-214ENST00000619416 8233 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 TTC41P-205ENST00000551270 3963 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 LINC01504-201ENST00000436054 2078 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 KRT39-201ENST00000355612 1696 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 TCF4-284ENST00000637169 7553 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 LALBA-201ENST00000301046 728 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 S100A1-202ENST00000368696 522 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 FABP3-201ENST00000373713 725 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 RNU6-157P-201ENST00000383957 107 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 RSL24D1P4-201ENST00000400938 484 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 OR2W4P-201ENST00000406496 926 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 C9orf147-201ENST00000412934 584 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 VDAC1P10-201ENST00000416715 891 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC114814.2-201ENST00000419195 485 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC006960.1-201ENST00000419980 153 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 GAPDHP49-201ENST00000421421 961 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC011233.1-201ENST00000422812 283 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AP003385.1-201ENST00000426387 893 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 VN1R108P-201ENST00000431580 830 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC090018.1-201ENST00000434369 367 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC234771.4-201ENST00000441416 730 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 CUBNP2-201ENST00000443534 1139 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 BX323845.2-201ENST00000458382 234 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 RN7SL649P-201ENST00000496974 275 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC093755.1-201ENST00000512950 1023 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 HMGB1P23-201ENST00000518743 568 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 CASC11-203ENST00000519071 791 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 OR52K3P-201ENST00000531655 943 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AP002373.2-201ENST00000541631 1060 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 LINC02392-202ENST00000549313 574 ntTSL 4 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 Metazoa_SRP.57-201ENST00000597717 283 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC011453.2-201ENST00000603737 729 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AP005212.3-201ENST00000619964 528 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC006840.1-201ENST00000623069 542 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC092608.3-201ENST00000625017 386 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 OR2AT4-203ENST00000641541 8795 ntAPPRIS P1 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 LINC01440-201ENST00000416190 1340 ntTSL 5 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 ZNF736P9Y-201ENST00000439586 1345 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 TPRG1-204ENST00000433971 2296 ntAPPRIS P1 TSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC119674.1-213ENST00000641177 1386 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC106872.5-201ENST00000508856 1416 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 FPGT-208ENST00000534056 1426 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 AC005332.9-201ENST00000620266 2921 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 DDX18P4-201ENST00000511690 1966 ntBASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 CDH13-209ENST00000567109 8042 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
TRIM55Q9BYV6 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 FIRRE-202ENST00000637577 1635 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC005225.5-201ENST00000623547 2225 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AP002800.1-201ENST00000624982 2225 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 PDZRN4-201ENST00000298919 3411 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 ASTN2-AS1-201ENST00000418250 1756 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 RNF6P1-201ENST00000444889 1784 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 OR11H1-201ENST00000252835 982 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 SNORD8-201ENST00000363915 110 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 SNORA11.3-201ENST00000408471 128 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AL357833.2-201ENST00000426811 430 ntTSL 3 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 RPL3P11-201ENST00000434028 1146 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC009518.3-201ENST00000438972 253 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 H3F3BP1-201ENST00000440551 403 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC004160.1-211ENST00000445839 565 ntTSL 4 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AL451164.2-201ENST00000445932 597 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC079776.3-201ENST00000450665 370 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 NPM1P9-201ENST00000453156 844 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 BX248409.1-201ENST00000455497 255 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 LINC01487-201ENST00000462531 905 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 AC083806.1-201ENST00000468934 316 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 SH2D1A-203ENST00000477673 461 ntTSL 2 BASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 RN7SL502P-201ENST00000481857 290 ntBASIC6.65□□□□□ -1.34
TRIM55Q9BYV6 GAPDHP39-201ENST00000481866 979 ntBASIC6.65□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms