Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 OR4C13-201ENST00000555099 1029 ntAPPRIS P1 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 ETFRF1-211ENST00000557540 1259 ntAPPRIS ALT1 TSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 AC009237.13-201ENST00000603193 276 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 AC008555.3-201ENST00000603717 442 ntTSL 3 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 MIR6862-1-201ENST00000613016 70 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 MIR6862-2-201ENST00000614755 70 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 LINC01320-210ENST00000626008 929 ntTSL 5 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 GLRA2-202ENST00000355020 1730 ntAPPRIS ALT1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 AC112198.2-201ENST00000426589 6996 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 TET1P1-201ENST00000426627 2301 ntBASIC5.13□□□□□ -1.59
COL21A1Q96P44 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.13□□□□□ -1.59
COL21A1Q96P44 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC5.13□□□□□ -1.59
COL21A1Q96P44 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 C1orf140-202ENST00000439004 4340 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 CD86-204ENST00000469710 1604 ntTSL 2 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 FHIT-201ENST00000341848 174 ntTSL 3 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 MIR323A-201ENST00000362199 86 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 RN7SKP28-201ENST00000364770 305 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 RN7SKP6-201ENST00000364795 319 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 CDC123-202ENST00000378900 933 ntTSL 5 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 AL592078.1-201ENST00000421866 321 ntTSL 3 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 NAP1L4P3-201ENST00000432820 1147 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 AL136455.1-201ENST00000441083 1240 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 AP000281.1-201ENST00000444036 316 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 AC073909.1-201ENST00000447112 999 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 RN7SL717P-201ENST00000478343 297 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 AC111149.1-201ENST00000522560 343 ntTSL 3 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 IGKV3D-34-201ENST00000522638 302 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 AC027544.3-201ENST00000535082 757 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 RN7SL290P-201ENST00000578661 300 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 MIR1273E-201ENST00000581165 102 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 AC107993.1-201ENST00000591343 684 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 AL356608.1-201ENST00000610034 820 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 AL163952.1-201ENST00000612704 916 ntTSL 5 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 uc_338.7-201ENST00000621834 124 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 SEC24D-211ENST00000511481 2626 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 PATE4-201ENST00000457514 1983 ntAPPRIS P2 TSL 2 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.12□□□□□ -1.59
COL21A1Q96P44 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.12□□□□□ -1.59
COL21A1Q96P44 OR5AQ1P-202ENST00000641257 1534 ntBASIC5.12□□□□□ -1.59
COL21A1Q96P44 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC021074.3-201ENST00000476385 1825 ntTSL 2 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 SULF1-204ENST00000458141 5551 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 RAPH1-207ENST00000423104 1860 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 RAPH1-209ENST00000439222 1854 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC104623.2-202ENST00000623477 4002 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 ADAM18-202ENST00000379866 2314 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 APOA2-201ENST00000367990 474 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AL139095.4-201ENST00000379928 500 ntTSL 2 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC012499.1-201ENST00000412133 741 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC009498.1-201ENST00000419860 541 ntTSL 4 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 LINC00458-201ENST00000423442 1060 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
COL21A1Q96P44 LINC01762-201ENST00000423907 454 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 OR6D1P-201ENST00000436165 939 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 LINC01911-201ENST00000450667 806 ntTSL 5 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 USP9YP2-201ENST00000504503 1000 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 OSMR-AS1-201ENST00000506463 800 ntTSL 3 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 USP9YP1-201ENST00000513521 1002 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC5.11□□□□□ -1.59
COL21A1Q96P44 LSM3P2-201ENST00000551246 273 ntBASIC5.11□□□□□ -1.59
COL21A1Q96P44 AC015720.2-201ENST00000567709 334 ntBASIC5.11□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms