Protein–RNA interactions for Protein: Q96NR3

PTCHD1, Patched domain-containing protein 1, humanhuman

Predictions only

Length 888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1Q96NR3 HMGN2P46-204ENST00000409454 1923 ntTSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 ARL14EPL-201ENST00000601302 1914 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL137100.1-201ENST00000556703 1620 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC016251.2-201ENST00000623393 3089 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 LCP1-202ENST00000398576 3944 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 C11orf72-201ENST00000333139 2431 ntTSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 SNORA70.3-201ENST00000365075 132 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 TRGV8-201ENST00000390343 468 ntAPPRIS P1 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC093719.1-202ENST00000392735 373 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 TAF9BP1-201ENST00000396646 746 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 OTUD6B-202ENST00000404789 1089 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL138826.1-202ENST00000415106 692 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC118754.1-201ENST00000416958 370 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC105275.1-201ENST00000417794 491 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 RPL36P18-201ENST00000419316 318 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 SPATA20P1-201ENST00000423089 438 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 YWHAEP5-201ENST00000431545 765 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 DEFA9P-201ENST00000433042 285 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 CDC27P1-201ENST00000445384 715 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 SUMO2P2-201ENST00000456482 255 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 CCDC75P1-201ENST00000469247 791 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 RPL23AP37-201ENST00000479658 549 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 RN7SL502P-201ENST00000481857 290 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC011825.1-201ENST00000484967 388 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC008770.1-202ENST00000495324 516 ntTSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC113430.1-201ENST00000506872 718 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 CBX3P3-201ENST00000508108 532 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 BTG4P1-201ENST00000510421 183 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC079140.3-201ENST00000511111 550 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC022784.1-201ENST00000512942 699 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 MRPS5P3-201ENST00000515577 166 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 RNA5SP116-201ENST00000516132 98 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 RN7SKP196-201ENST00000516267 345 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 RNU6-678P-201ENST00000516832 109 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AP003438.1-201ENST00000518704 435 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 TPT1-AS1-206ENST00000519454 709 ntTSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC114550.3-201ENST00000524073 579 ntTSL 4 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 OR5AZ1P-201ENST00000527448 943 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 CBX3P7-201ENST00000532876 502 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 ASB8-207ENST00000536953 923 ntTSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 CR383656.11-201ENST00000552261 498 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 LINC02303-202ENST00000554711 531 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 FXNP1-201ENST00000555153 337 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL133241.1-201ENST00000556832 487 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC044913.1-201ENST00000557200 430 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL162464.1-201ENST00000557642 554 ntTSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC015660.3-201ENST00000559569 198 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC136285.2-201ENST00000562873 378 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC234778.2-201ENST00000566241 354 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL512347.1-201ENST00000566420 503 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 ANP32BP1-202ENST00000568553 737 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC012435.1-202ENST00000568772 240 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC024267.2-201ENST00000582737 417 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC023421.2-202ENST00000586213 547 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 BNIP3P30-201ENST00000601184 574 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC005479.3-201ENST00000602790 431 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 U73023.1-201ENST00000603134 700 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC006270.3-201ENST00000605967 1036 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC108747.1-201ENST00000609508 535 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 SAMD12-AS1-201ENST00000625758 718 ntTSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 CLUHP10-201ENST00000631979 980 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AC087821.2-201ENST00000637086 450 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 PLEKHA1-204ENST00000392799 3221 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 TRAPPC13-202ENST00000399438 3221 ntAPPRIS ALT1 TSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 LINC00598-211ENST00000636621 3241 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 GABRA6-207ENST00000523217 2393 ntTSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 RABGAP1L-218ENST00000489615 6821 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 TOR1AIP1-202ENST00000435319 3397 ntAPPRIS ALT2 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 LINC01087-201ENST00000431979 3516 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 SUN3-201ENST00000297325 1416 ntAPPRIS P1 TSL 5 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 DICER1-202ENST00000393063 10220 ntAPPRIS P1 TSL 1 (best) BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 MAPK10-323ENST00000641493 3207 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 Z97989.1-201ENST00000531702 2421 ntBASIC6.33□□□□□ -1.4
PTCHD1Q96NR3 AL136531.3-201ENST00000624378 3658 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 RACGAP1P-201ENST00000550663 1879 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ASNSP6-201ENST00000592770 1618 ntBASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 ANK2-201ENST00000264366 11775 ntAPPRIS ALT2 TSL 5 BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 TEAD1-201ENST00000334310 3075 ntTSL 1 (best) BASIC6.32□□□□□ -1.4
PTCHD1Q96NR3 TEAD1-205ENST00000527575 3063 ntTSL 5 BASIC6.32□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 153 ms